Gene BMA10247_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_2384 
Symbol 
ID4893051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp2342915 
End bp2344510 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content69% 
IMG OID640151036 
ProductDHA2 family drug:H+ antiporter-1 
Protein accessionYP_001081910 
Protein GI126450473 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTCC ATACCGCCGC CCACCATTCG AGCGGGCAAG TCCTTCCGTT TCGCGAGTCG 
CTGCTCGCGA TGCTCGGCAT CTCCTTCGTC ACGATGCTCG TCGCGCTCGA CCAGACCGTC
GTCGGCACCG CGCTGCCGAC GATCGTCGCC GAGCTGCGCG GCTTCGATCT GTACGCGTGG
GTCGCCACGT CGTACCTGCT CGCGTCGGTG ATCACCGTGC CGATCTTCGG GCGGCTCGGC
GATTACTACG GGCGCAAGCC GTTCGTGATC GCGTCGCTCG TCGTGTTCAC GGGCGCGTCG
GTGCTGTGCG CGATGGCGCA GGACATGCTG TCGCTCGTGC TCGCGCGCGG CTTGCAGGGG
ATCGGCGGCG GGATGCTCGT CGGCACCGCG TTCGCGTGCA TTCCGGATCT CTTCCCCGAT
TCGGTCGTGC GGCTGCGCTG GCAGGTGCTG ATGAGCTCGG CGTTCGGGAT CGCGAACGCG
GTCGGCCCGT CGCTCGGCGG CGTGCTCACG CAGAATTACG GCTGGCGCGC GGTGTTCTAC
GTGAATCTGC CGGTGGGCCT GCTGTCGATC TTTTTCGTCT GGCGCTATCT GCCGCACATG
CGGCACGTCG AGCACACGCG GAAGATGCGG CTCGACTGGC CGGGCGCGCT CCTCATCGCC
GTGACGCTCG GCGCGATGCA GCTGTTCGTC GAATGGCTGC CGAAATACGG AATCGGCGGC
TGGCCGACGC TGCTGCTCGT CGCCGCGCTC GCGGGCGGCG TCGCGCTGTG GCGCTGGGAG
AAGCGCTGCG CGCAGCCGAT CCTGCCGTTC GACATGTTCT CGAACCGCGC GCTGTCCACG
CTGTTCATCC TCGCGATCCT CGCCGGCTTC GCGATGTTCT CGCTGCTCTT CTACGCGCCG
CTGCTGTTCC AGGGCGGCTT CGGGATGTCG CCGCAGCAGG CGGGCGTCGT CATCACGCCG
CTCGTCGTGT TCATCACGAT CGGCAGCATC ATGAACGGCC GCGTGATCAC GCGGATCCGC
CGTCCGAACG CGATGCTGTA CGTCGGCTTC CTGCTGTTCG CGCTCGCGTG CGCGGGCGTC
GTCGCGTCGA CGCATGCGAC GTCGGGCTGG GCGCTGATGG CGCTGATGGT CGCGGGCGGC
GTGGGCCTCG GCTTCGTGCT GCCGAACCTG ACCGTGTTCG CGCAGCAGAC GGCGGGCCGC
GAGCATCTCG GGATCGCGAC CGCGCTGCTG CAGTCGCTGC GCATGGTGGG CGGCATGCTC
GGCACGGCAC TCACCGGCAC GCTCGTCAAT CAGCTCTACG CGAACGGCGT GCGCGACGCG
CTCGCCGCGG ACGGCGCGTT GCGCTGGCAG GCACGCCTTG CCGATCCTCA GGTGCTGATC
GACCGCGCCG CGCAGTCGCG CGTGGTGGAC GAACTCGTGC GCGCCGGGCA TCATGGCGCC
CATTTGCTCG AAGCGGCGCG CGAATCGCTC GTCGGCGCGA TCCATATCGG CATCGGCGTC
GGCGCGTTCG TCGCGCTCGC GGCGGTGTGG CAAAGCCGCT GCGTGCCGCC CGTCGAGCTG
CGCCGCAAGC TCGAGCCGGC CGTCCTCGCC GAGTGA
 
Protein sequence
MAVHTAAHHS SGQVLPFRES LLAMLGISFV TMLVALDQTV VGTALPTIVA ELRGFDLYAW 
VATSYLLASV ITVPIFGRLG DYYGRKPFVI ASLVVFTGAS VLCAMAQDML SLVLARGLQG
IGGGMLVGTA FACIPDLFPD SVVRLRWQVL MSSAFGIANA VGPSLGGVLT QNYGWRAVFY
VNLPVGLLSI FFVWRYLPHM RHVEHTRKMR LDWPGALLIA VTLGAMQLFV EWLPKYGIGG
WPTLLLVAAL AGGVALWRWE KRCAQPILPF DMFSNRALST LFILAILAGF AMFSLLFYAP
LLFQGGFGMS PQQAGVVITP LVVFITIGSI MNGRVITRIR RPNAMLYVGF LLFALACAGV
VASTHATSGW ALMALMVAGG VGLGFVLPNL TVFAQQTAGR EHLGIATALL QSLRMVGGML
GTALTGTLVN QLYANGVRDA LAADGALRWQ ARLADPQVLI DRAAQSRVVD ELVRAGHHGA
HLLEAARESL VGAIHIGIGV GAFVALAAVW QSRCVPPVEL RRKLEPAVLA E