| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2212 |
|---|
| Symbol | hrcA |
|---|
| ID | 4893019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 2178495 |
|---|
| End bp | 2179517 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640150865 |
|---|
| Product | heat-inducible transcription repressor |
|---|
| Protein accession | YP_001081741 |
|---|
| Protein GI | 126451351 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATC CACGCGCACG AACCCTCCTC AAGACACTGA TCGAGCGGTA TATCGCCGAC
GGTCAGCCGG TCGGATCGCG CACGTTGTCT CGTTATTCCG GGCTCGAGCT GAGCCCGGCG
ACGATCCGCA ACGTGATGTC CGATCTGGAG GAGCTCGGCC TCGTGTCGAG CCCGCATACG
TCGGCCGGCC GGGTACCGAC GCCGCGCGGC TACCGGCTGT TCGTCGACAC GATGCTGACC
GTCGAGTCGC CGATCGATTC CGACGCGGTC ACGCGGCTCG TGCAGACCAC GCTGCAGGCG
GGCGAGCCGC AGCAGCGGGT CGTCGCGGCC GCGGCGAGCG TGCTGTCGAA CCTGTCGCAG
TTCGCGGGCG TCGTGCTCAC GCCGCGCCGC AGCCACGTGT TCAAGCAGAT CGAATTCCTG
CGCCTGTCGG ACAAGCGGAT CCTCCTCATC ATCGTGACGC CCGAAGGCGA CGTGCAGAAC
CGCATGATCG CGACGCAGCG CGACTACGCG CCCGCGCAGC TCACCGAGGC GTCGAACTAC
ATCAACGCGC ACTTCGCCGG CCTGTCGTTC GACGAGGTGC GCCGCCGGCT GCGCGAGGAA
ATCGATCAGC TGCGCGGCGA CATGACGGCG CTGATGCACG CGGCCGTCAC GGCGAGCACC
GAGGAGCCCG ACGACGAGGA AACCGTGCTG ATCTCCGGCG AGCGCAACCT GCTCGAGGTG
GCCGATCTGT CGTCCGACAT GGCGCGCCTG CGCAAGCTGT TCGACGTGTT CGACCAGAAG
ACGAGCCTGC TGCAACTGCT CGACGTGTCG AGCCACGCGC AAGGGGTGCA GATCTTCATC
GGCGGCGAAT CGACGCTCGT GCCGATCGAC GAGATGAGCG TCGTGACCGC GCCGTACGAG
GTCAACGGCA AGATCGTCGG CACGCTCGGC GTGATCGGCC CGACGCGCAT GGCTTACAAC
CGCGTGATTC CGATCGTCGA CATCACCGCG CGCCTGCTGT CGCTCACGCT CAGCCAGCAG
TAA
|
|---|
| Protein sequence | MLDPRARTLL KTLIERYIAD GQPVGSRTLS RYSGLELSPA TIRNVMSDLE ELGLVSSPHT
SAGRVPTPRG YRLFVDTMLT VESPIDSDAV TRLVQTTLQA GEPQQRVVAA AASVLSNLSQ
FAGVVLTPRR SHVFKQIEFL RLSDKRILLI IVTPEGDVQN RMIATQRDYA PAQLTEASNY
INAHFAGLSF DEVRRRLREE IDQLRGDMTA LMHAAVTAST EEPDDEETVL ISGERNLLEV
ADLSSDMARL RKLFDVFDQK TSLLQLLDVS SHAQGVQIFI GGESTLVPID EMSVVTAPYE
VNGKIVGTLG VIGPTRMAYN RVIPIVDITA RLLSLTLSQQ
|
|---|
| |