| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2022 |
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| Symbol | ubiD |
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| ID | 4893351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 1988995 |
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| End bp | 1990554 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640150677 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_001081554 |
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| Protein GI | 126451203 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.79917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA GAGATTTACG CGATTTCATC CATGGCCTCG AGCAGCGCGG CGAGTTGCGG
CGCGTCACCC AGCCCGTATC GCCCGTCCTC GAAATGACCG AACTCTGCGA CCGCGTGCTG
CGCGCGGGCG GCCCCGCACT CCTGTTCGAC GCGCCGGCCG GCCACCGGTT TCCGGTGCTC
GGCAATCTGT TCGGCACGCC GCGGCGCGTC GCGCTCGGCA TGGGCGTCGA CGCCGACGAC
GAAGCGGCGC TCGCGTCGCT GCGCGACATC GGCCGCCTGC TGTCCGCGCT CAAGGAGCCG
GACCCGCCGA AGCGCCTGAA AGACGCGGGC AAGTTGCTGT CGCTCGCGAA GGCCGTGTGG
GACATGGGCC CGAAGACGGT CTCCGCGCCG CCGTGCCAGG AGATCGTCTG GGAAGGCGAC
GACGTCGATC TGCACAAGCT GCCGATCCAG ACCTGCTGGC CGGGCGACGC CGGGCCGCTG
CTCACGTGGG GCCTGACCGT CACGCGCGGG CCGAACAAGA CGCGCCAGAA TCTGGGCATC
TACCGGCAGC AACTGATCGG ACGCAACAAA CTGATCATGC GCTGGCTCGC GCATCGCGGC
GGCGCGCTCG ATTTCCGCGA ATTCGCGCTG AAGCATCCGG GCCAGCCCTA TCCCGTCGCC
GTCGTGCTCG GCGCCGATCC GGCGACGATG CTCGGGGCCG TCACGCCCGT GCCCGATTCG
CTGTCCGAAT ACCAGTTCGC GGGCCTGCTG CGCGGCGCGC GCACCGAGCT CGCGAAATGC
GTGACGCCCG GCGTCGACGC GCTGCAGGTG CCGGCGCGCG CGGAAATCGT GCTCGAAGGC
TTCATCCACC CGCAGCAAGG CGCGCCCGCG CCGGCGCCCG AAGGCGCGCC GCCGCGGCCG
GCCGCGGGCG CGGCGGCCGG CTACGAGCAT GCGCTCGAGG GCCCGTACGG CGATCACACC
GGCTACTACA ACGAGCAGGA ATGGTTTCCG GTCTTCACGG TCGAGCGGAT CACGATGCGC
CGCGATGCGA TCTACCACTC GACGTACACC GGCAAGCCGC CCGACGAGCC GGCCGTGCTC
GGCGTCGCGC TGAACGAAGT GTTCGTGCCG CTGCTGCAGA AGCAGTTCGC CGAGATCACC
GATTTCTATC TGCCGCCCGA GGGTTGCAGC TACCGGATGG CGATCGTCCA GATGAAGAAG
AGTTACGCGG GACACGCGAA GCGGGTGATG TTCGGCGTCT GGAGCTTCCT GCGGCAGTTC
ATGTATACGA AGTTCATCGT GGTCGTCGAC GAGGACGTGA ACGTGCGCGA CTGGAAGGAA
GTGATCTGGG CGATCACGAC GCGCGTCGAT CCGGCGCGCG ACACGGTGCT CGTCGAGAAC
ACGCCGATCG ACTATCTCGA CTTCGCGTCG CCCGTCGCCG GCCTCGGCTC GAAGATGGGG
CTCGATGCGA CCAACAAGTG GCCGGGCGAA ACCCAGCGCG AATGGGGCCG GCCGATCGAG
ATGGACGCCG CCGTGAAGGC GCGCGTCGAT CGTCTGTGGA CGGAGATCGG CCTATCGTGA
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| Protein sequence | MKYRDLRDFI HGLEQRGELR RVTQPVSPVL EMTELCDRVL RAGGPALLFD APAGHRFPVL
GNLFGTPRRV ALGMGVDADD EAALASLRDI GRLLSALKEP DPPKRLKDAG KLLSLAKAVW
DMGPKTVSAP PCQEIVWEGD DVDLHKLPIQ TCWPGDAGPL LTWGLTVTRG PNKTRQNLGI
YRQQLIGRNK LIMRWLAHRG GALDFREFAL KHPGQPYPVA VVLGADPATM LGAVTPVPDS
LSEYQFAGLL RGARTELAKC VTPGVDALQV PARAEIVLEG FIHPQQGAPA PAPEGAPPRP
AAGAAAGYEH ALEGPYGDHT GYYNEQEWFP VFTVERITMR RDAIYHSTYT GKPPDEPAVL
GVALNEVFVP LLQKQFAEIT DFYLPPEGCS YRMAIVQMKK SYAGHAKRVM FGVWSFLRQF
MYTKFIVVVD EDVNVRDWKE VIWAITTRVD PARDTVLVEN TPIDYLDFAS PVAGLGSKMG
LDATNKWPGE TQREWGRPIE MDAAVKARVD RLWTEIGLS
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