Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1977 |
Symbol | |
ID | 4891450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 1947279 |
End bp | 1948961 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640150632 |
Product | chloride channel (ClC) family protein |
Protein accession | YP_001081510 |
Protein GI | 126450849 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACCTT TTTGCGCACC GACGCCCATG CAACGCCCCA GCCTGTTCCC GACTCTCACG CGCCGCACGC AGCGCATCTG GCGCCAATAT GGCGTGTTCT GGCTCGGCGC GGTCGTGGTG GGCCTGACGG CCGTGATGTA CGCACGGCTC ATCGACTGGG GCTACGAGGC GTTCCGTTCG CTCGGGCAAG GGCGTCCGTG GCTGCCCTTC CTGCTGACGC CCGCCATCGC CGCGCTGTCC GTGTGGCTCA CGCGCCGCTT CTTTCGCGGC GCCGAGGGCA GCGGGATTCC TCAGGTGATC GCGACGCTGC ACGCGCAGCC GAGCGCGTTC GGCTCGCGGC TGCTCACGCT GCGCATCCTG TTCGGCAAGG TCCTGATCTC GTTGCTCGGC ATCGCCGGCG GCTTCACGAT CGGCCGCGAA GGGCCGACCG TGCAGATCGG CGCGTCGCTG ATGTTCAACC TGCGCCGCTT CTACCCGCGC TCGAACGCGC TGATCGAACG CCAGCTCGTG CTCGCGGGCG CCGCCGCCGG CCTGTCCGCC GCGTTCAACA CGCCGCTCGC CGGCGTCGTG TTCGCGATCG AGGAACTGAG CCGCAGTTTT TCGGCACGCG CGAGCGGCGT GCTGATCACC GCGATCATCA TCGCCGGCGT GATCGCGCTC GGCCTGAACG GCAACTACAC CTACTTCGGC ACGATCGAGA TCGGCCAGCA TTTTCCGAAG ATGCTCGCGG CCGCCGTGCT GCTGACCGCG CTCGTCACGG GCGTCGCGGG CGGTCTGTTC GGCTGGCTGC TGCTGAACAC CGGCCGCTGG CTGCCGGCGA GGCTGCTCGC GCTCTACCGC GAGCGGCCGA TCGTGTTCGC GGCGGCCTGC GGCCTCGCGA TCGCCGCCGT CGGCGTCGCA TCCGGCGGCA CGACGTTCGG CAGCGGCTAT GCGGAGGCGC GCGGGCTCCT CGACGGCCGC GAACAGTTGT CCGTCCTGTA TCCGTTCCTG AAAATGATCT CGATGGTCGC GTCGTACCTG CCCGGGATTC CGGGCGGGAT CTTCGCGCCT TCGCTATCGA TCGGCGCGGG TTTCGGCAAT CTGCTGCACT TCGTGTTCAG CGGCATGCAC CTGCCGATGC TGATCGCGCT CGCGATGGTC GGCTATCTCG CGGCCGTCAC GCAATCGCCG ATCACGTCGT TCGTCATCGT GATGGAGATG ATCAACGGCC ACGCGCTCGT GATCTCGTTG ATGGCCACCG CGCTGATCGC AAGCCGCGTC TCGCGCCTGT TCGTGCCGCC GCTCTACGAG ACGCTCGCCG AGCGCTATCT GAAGCCGCCG CAACCGAAGC AGGCGGCCAC GGCCCCCGCG CATACCGGCA TCGCGGCGGT CAAGATGCCC GAGGACGCCG AATCGGCGCC CGCCGATCCG CTCGATACGC TGCGCGACGA AGCCGCGAAC GAAGCGAATA CGAACGAGCG CGATGCGGGC GACGCCGGCG GGCATACCGG CGCGGGCGCG GCGGCGCACG CCGATGATGC GCCGTGCGGC GCGGCCGATG CCGCCCGCGC GGGCGCGCCG CCCGACGCGA GCCCGGCATC GGCGCCCGGC GCGGCCGGCG CGTCGAACAC GCGCGCGAAC GACCCGACAC CGCCGTCGGG CGACGGCGAG AATCGTGAGC CGCCGCAGCG CCCCGCTCAA TAG
|
Protein sequence | MSPFCAPTPM QRPSLFPTLT RRTQRIWRQY GVFWLGAVVV GLTAVMYARL IDWGYEAFRS LGQGRPWLPF LLTPAIAALS VWLTRRFFRG AEGSGIPQVI ATLHAQPSAF GSRLLTLRIL FGKVLISLLG IAGGFTIGRE GPTVQIGASL MFNLRRFYPR SNALIERQLV LAGAAAGLSA AFNTPLAGVV FAIEELSRSF SARASGVLIT AIIIAGVIAL GLNGNYTYFG TIEIGQHFPK MLAAAVLLTA LVTGVAGGLF GWLLLNTGRW LPARLLALYR ERPIVFAAAC GLAIAAVGVA SGGTTFGSGY AEARGLLDGR EQLSVLYPFL KMISMVASYL PGIPGGIFAP SLSIGAGFGN LLHFVFSGMH LPMLIALAMV GYLAAVTQSP ITSFVIVMEM INGHALVISL MATALIASRV SRLFVPPLYE TLAERYLKPP QPKQAATAPA HTGIAAVKMP EDAESAPADP LDTLRDEAAN EANTNERDAG DAGGHTGAGA AAHADDAPCG AADAARAGAP PDASPASAPG AAGASNTRAN DPTPPSGDGE NREPPQRPAQ
|
| |