Gene BMA10247_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1950 
SymbolopcL 
ID4894468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp1925190 
End bp1925702 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID640150605 
Productpeptidoglycan-associated outer-membrane lipoprotein 
Protein accessionYP_001081487 
Protein GI126451181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.931309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCGA AGAAACTTCG TCTGGCGTTC GCGATGCTGA TGATCGGCGC GCTCGCGGCA 
TGCAAGTCGG GCGTGAAGCT CGACGAGCAC GCGAACCAGG GCGACGCGGT CAGCACGCAA
CCGAATCCCG AAAACGTCGC GCAGGTGACC GTCGATCCGC TGAACGATCC GAACAGCCCG
CTCGCGAAGC GCAGCGTGTA CTTCGATTTC GACAGCTACT CGGTGCAGGA CCAATACCAG
GCGCTGCTGC AGCAACACGC GCAATACCTG AAGAGCCATC CGCAACGCCA CATCCTGATC
CAGGGCAACA CCGACGAGCG CGGCACGAGC GAGTACAACC TCGCGCTCGG CCAAAAGCGT
GCGGAAGCCG TGCGCCGCGC GCTGTCGCTG CTCGGCGTCG GGGATGCGCA GATGGAAGCC
GTGAGTCTCG GCAAGGAAAA GCCGGTTGCG CTCGGCCACG ACGAAGCGTC GTGGGCGCAG
AACCGCCGTG CGGACCTCGT CTATCAACAG TAA
 
Protein sequence
MMSKKLRLAF AMLMIGALAA CKSGVKLDEH ANQGDAVSTQ PNPENVAQVT VDPLNDPNSP 
LAKRSVYFDF DSYSVQDQYQ ALLQQHAQYL KSHPQRHILI QGNTDERGTS EYNLALGQKR
AEAVRRALSL LGVGDAQMEA VSLGKEKPVA LGHDEASWAQ NRRADLVYQQ