Gene BMA10247_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1850 
SymbolrfbC 
ID4893241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand- 
Start bp1831866 
End bp1832417 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content56% 
IMG OID640150505 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001081387 
Protein GI262193266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.28686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCC AAGTAACTGC TACCGCTTTG CCGGAAGTCA AGATTATCGA ACCGAAGGTA 
TTCGGCGATG CTCGCGGATT CTTCTTCGAG AGCTTCAATG CTCGAGAATT TACAGAACTC 
GTTGAGCCGG GCATCGAATT CGTTCAGGAC AATCACTCCC GATCCGCCCG TGGCGTGCTT 
CGCGGCCTGC ACTATCAAAT TCAGCACGCG CAAGGGAAAC TCGTGCGTGT AGTCGACGGC 
GAAGTGTTCG ACGTCGCGGT CGATGTCCGG AGGAGTTCGC CCAATTTCGG TAAGTGGGTT 
GGCGTACGGC TGTCTGCGGA GAACAAGCGG CAGCTTTGGG TGCCGGCGGG CTTCGCGCAT 
GGCTTCGTTG TACTGAGCGA ATCAGCGGAT TTTCTGTACA AGACGACCGA CTATTGGTAT 
CCGGAGTTTG AGCGGAGCAT CCTTTGGAGC GACAAGCAAA TCGGTATCGA ATGGCCGATT 
GATCGGGAGC CGCTTGTTGC TGCAAAGGAT GCCGCGGGCA AGGCGATTAG CGAAGCCGAG 
GTCTATGCAT GA
 
Protein sequence
MAIQVTATAL PEVKIIEPKV FGDARGFFFE SFNAREFTEL VEPGIEFVQD NHSRSARGVL 
RGLHYQIQHA QGKLVRVVDG EVFDVAVDVR RSSPNFGKWV GVRLSAENKR QLWVPAGFAH 
GFVVLSESAD FLYKTTDYWY PEFERSILWS DKQIGIEWPI DREPLVAAKD AAGKAISEAE 
VYA