| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1813 |
|---|
| Symbol | |
|---|
| ID | 4891722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1794259 |
|---|
| End bp | 1795266 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640150468 |
|---|
| Product | RluA family pseudouridine synthase |
|---|
| Protein accession | YP_001081352 |
|---|
| Protein GI | 126448075 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0797823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGT TAGGCAAAAA ATCCCATAAT TCGGTCGCAA GCGGTCAGGT TTCGCTCATC
GAGATCGACG AAAGCGCGGC CGGGCAGCGC ATCGACAACT TCCTGCTGCG CGTCTGCAAG
GGCGTGCCGA AGAGTCATAT TTACCGGATC CTGCGCAGCG GCGAAGTCCG CGTGAACAAG
GGCAGAATCG ATGCGCAGTA CCGGCTCGCG TTCGGCGACG TCGTGCGCGT GCCGCCCGTG
CGCGTCGCGG CGGCGGACCT CGCGCGCGCG GCCGGCCCGG CGCCCGTGCC CGCCGCGGAA
TTCGAGATCC TGTTCGAGGA CGACGCGATC ATCGTGCTGA ACAAGCCGGC GGGCGTCGCC
GTGCACGGCG GCAGCGGCGT CGCGTTCGGC GTGATCGAGC AGATGCGCCA TGCGCGGCCG
CACGCGAAAT TCCTCGAACT CGCGCACCGG CTCGACCGCG AGACCTCGGG CATCCTGATG
CTCGCGAAGA AGCGCTCGGC GCTCGTCGGG CTGCACGAGC AGATTCGCGA GAACCGGATG
GACAAGCGCT ACTTCGCCTG CGTGCATGGC GACTGGGCGG CCGACTGGGG CCGCCGCCGC
GTGGTGAAGG CGCCCCTTTT CAAGTACGCG ACGCCCGACG GCGAGCGGCG CGTGCGGGTT
CAGGAGGACG GCCTGCCGTC GCACACGGTG TTCAATCTCG TCGACCGCTG GCCGGACTAC
GCGCTCGTCG AAGCGGAACT CAAGACGGGG CGGACCCATC AGATCCGCGT GCACCTCGCG
CATCTCGGCC TGCCGATCGT CGGCGACGCC AAGTACGGCG ATTTCGCGCT GAACAAGGCG
CTTGCGCGCG CGAACGCGGT GCCGTCGATC AAGCGGATGT TCCTGCACGC GCATCGGCTG
CGCCTCGCGC ATCCGCTGAC GGGCGAGCCG CTGCAGTTCG ACGCGCCGCT GCCCGCCGAG
TGCCGGCAAT TCATCGATCA ACTCTCCGAC TTGCGCGACA CCGCGTGA
|
|---|
| Protein sequence | MNELGKKSHN SVASGQVSLI EIDESAAGQR IDNFLLRVCK GVPKSHIYRI LRSGEVRVNK
GRIDAQYRLA FGDVVRVPPV RVAAADLARA AGPAPVPAAE FEILFEDDAI IVLNKPAGVA
VHGGSGVAFG VIEQMRHARP HAKFLELAHR LDRETSGILM LAKKRSALVG LHEQIRENRM
DKRYFACVHG DWAADWGRRR VVKAPLFKYA TPDGERRVRV QEDGLPSHTV FNLVDRWPDY
ALVEAELKTG RTHQIRVHLA HLGLPIVGDA KYGDFALNKA LARANAVPSI KRMFLHAHRL
RLAHPLTGEP LQFDAPLPAE CRQFIDQLSD LRDTA
|
|---|
| |