| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1625 |
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| Symbol | panD |
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| ID | 4893861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 1622892 |
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| End bp | 1623278 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640150282 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_001081169 |
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| Protein GI | 126448522 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00269652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCGCC ACATGCTGAA ATCGAAGATC CACCGCGCGG CGGTCACGCA CTGCGAGCTG
CATTACGAAG GCTCGTGCGC GATCGACGAG GACTTGCTCG AAGCGGCGAA CATCGTCGAG
AACGAGCGGA TCGACATCTG GAACGTCAAC AACGGCGAGC GCTTTTCGAC GTACGCGATC
AAGGGCGAGC GCGGCAGCGG GATGATTTCG CTGAACGGCT CGGCCGCGCG CCGCGCGCAA
CTGGGCGACC TCGTGATCAT CGCCGCGTTC GCGATGATCG ACGAGCAAGA ATTGAAGGCG
GGCTGGAAGC CGGATCTCGT GTTCGTCGAC GAAGACAACA AGATCAAGGG CAGCCGCGAT
CACGTGCCGA CGCAGAACTG GACGTAA
|
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| Protein sequence | MQRHMLKSKI HRAAVTHCEL HYEGSCAIDE DLLEAANIVE NERIDIWNVN NGERFSTYAI
KGERGSGMIS LNGSAARRAQ LGDLVIIAAF AMIDEQELKA GWKPDLVFVD EDNKIKGSRD
HVPTQNWT
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