Gene BMA10247_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1615 
Symbol 
ID4894364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand+ 
Start bp1608299 
End bp1608946 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID640150272 
ProductompA family protein 
Protein accessionYP_001081159 
Protein GI126449467 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.180495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA AAATCGCGAC GCGCTTGTCC GTTTTCGCTC TCGCCGGCGC CCTGCTGGCG 
GGTTGCGCAA CCCAGCAAGG CACCAACACG GCTGTCGGCA CCGGCACGGG CGCCGCGCTC 
GGCGCGGGCA TCGGCGCGCT CGCTGGCGGC GGCAAGGGCG CGGCGATCGG CGCCGGCGTC 
GGCGCGCTCG TCGGCGGCGT GACGGGTTAC AACTGGCAAG CGATCAAGAA CAAGCTCGCG 
CCGTCGGCGC AGCAAACGGG CACGCAGGTC ACCGAACAGC CGGACGGCTC GCTCAAGCTG 
AACGTGCCCA GCTCGGTCAC GTTCGCGACC GACCAGTACG CGATCACGCC GGCGTTCACG 
CCGCTGCTGA ACGACCTCGC GACGACGCTG AACCAGAACC CGCAGATCAC CGCGTCGGTC 
GTCGGCTACA CCGACAGCAC GGGCTCGGCC GCGCACAATC AAACGCTGTC GCAAAATCGC 
GCGCAAAGCG TCGTGAACGC GCTCGCGCAG CGCGGCGTCG CGGCGAACCG CCTGTCCGCG 
CAAGGCATGG GCGCGTCGAA CCCGATCGCC GACAACGCAA CGGAAGCCGG CCGCGCGCAA 
AACCGCCGCG TCGAGATCTA CCTGCGCGCG CCGCAAGCGG CGCAGTAA
 
Protein sequence
MNTKIATRLS VFALAGALLA GCATQQGTNT AVGTGTGAAL GAGIGALAGG GKGAAIGAGV 
GALVGGVTGY NWQAIKNKLA PSAQQTGTQV TEQPDGSLKL NVPSSVTFAT DQYAITPAFT 
PLLNDLATTL NQNPQITASV VGYTDSTGSA AHNQTLSQNR AQSVVNALAQ RGVAANRLSA 
QGMGASNPIA DNATEAGRAQ NRRVEIYLRA PQAAQ