Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1597 |
Symbol | hemC |
ID | 4892665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1586139 |
End bp | 1587128 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640150254 |
Product | porphobilinogen deaminase |
Protein accession | YP_001081141 |
Protein GI | 126449020 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.588858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCCG AGACTCTTCC GGCCGAGCTG CCCGCGACGC TGACGATCGC GTCGCGCGAG AGCCGCCTCG CCATGTGGCA AGCCGAGCAT GTGCGTGATG CGCTGCGCAA ATTATATCCA GCTTGTGACG TGAAAATCCT CGGGATGACG ACGCGCGGCG ATCAAATTCT CGATCGCACG CTATCGAAGG TCGGCGGCAA GGGTCTGTTC GTCAAGGAGC TCGAGAGCGC GCTTGCCGAC GGCCGCGCGG ATCTCGCCGT GCATTCGCTG AAGGACGTGC CGATGGCGCT GCCCGAAGGC TTCGCGCTCG CGGCGGTGAT GAGCCGCGAG GATCCGCGCG ACGCGTTCGT GTCGAACGAT TACGCGTCGC TCGACGCGCT GCCGGCGGGC GCCGTCGTCG GCACGTCGAG CCTGCGCCGC GAGGCGATGC TGCGCGCGCG CCATCCGCGG CTCGACGTGC GGCCGCTGCG CGGCAATCTC GACACGCGGC TCGCGAAGCT CGACCGCGGC GATTACGCGG CGATCATCCT CGCCGCCGCG GGCCTCAAGC GTCTCGGCCT CGCCGCGCGG ATCCGCGCGC TGCTCGACGT CGACGACAGC CTGCCCGCCG CGGGGCAGGG CGCGCTCGGC ATCGAGATCG CCGCGCGCCG CGCCGATGTC GCCGCGTGGC TCGCGCCGCT GCACGATCAT GCGAGCGCGC TCGCGGTCGA GGCCGAACGC GCGGTGTCGC GCGCGCTCGG CGGCAGTTGC GAGGTGCCGC TCGCCGCGCA CGCGGTGTGG CGCGGCGGCG AGCTGCATCT GACGGGCAGC GTGTCGACGA CGGACGGCGC GCGCGTGCTC GCCGCGCATG CGCACGCACG CGCGGCGACG GCCGCCGATG CGCTCGCGCT CGGCCGCAGG GTGTCCGACG CGCTCGAGCG GCAAGGCGCG CGCGCGATCG TCGACGCGCT CGTCGCGGCG AGCGCGCAAG CGCAAAAGGG CGGCGCGTGA
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Protein sequence | MNSETLPAEL PATLTIASRE SRLAMWQAEH VRDALRKLYP ACDVKILGMT TRGDQILDRT LSKVGGKGLF VKELESALAD GRADLAVHSL KDVPMALPEG FALAAVMSRE DPRDAFVSND YASLDALPAG AVVGTSSLRR EAMLRARHPR LDVRPLRGNL DTRLAKLDRG DYAAIILAAA GLKRLGLAAR IRALLDVDDS LPAAGQGALG IEIAARRADV AAWLAPLHDH ASALAVEAER AVSRALGGSC EVPLAAHAVW RGGELHLTGS VSTTDGARVL AAHAHARAAT AADALALGRR VSDALERQGA RAIVDALVAA SAQAQKGGA
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