Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1507 |
Symbol | prlC |
ID | 4894727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 1500256 |
End bp | 1502355 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640150165 |
Product | oligopeptidase A |
Protein accession | YP_001081054 |
Protein GI | 126449348 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTCA GCGCAAACGC CAACCCGCTT CTCGATTTTT CAGGCCTGCC CCGCTTCGGC GAAATTCGCC CCGAACACGT GACGCCCGCG CTCGATACGC TGCTCGCGAA CGCAAACGAC GCAGTCGAGC AAGCCGCGCG GCCCGACACG CCCGCGACCT GGGCCGATGT CGTCGAGACC ATCGAGCAGG CGACCGAGCC GCTCGGCCGC GCGTGGGGCG TCGTCGGCCA TCTGAACGCG GTCGCCGACA CGCCCGAGCT GCGCGCCGTC TACGGCGAGA ACCTGCCGCG CGTGACCGAG TTCTGGTCGA GCGTCGGCCA GAATCTCGCG CTCTACGAAA AGTACAAGGC GATCGCCGCG AGCCCCGAAT ACGCCGCGCT GTCCGCCGAG CGCAAGAAGA TCCTCGACAA CGCGCTGCGC GACTTCCGCC TGTCGGGCGC CGAGCTGCCG GAGGACCGCA AGCCGCGCTT CGCTCAGTTG CAGGAGCAGC AGGCGGCGCT GTCGAAGTCG TTCTCCGATC ACGTGCTCGA CGCGACGAAC GGCTACGCGT ACTACGCGCG CAGCGAGGAC GAACTGGCCG GCCTGCCCGA CGACGCGATC GCGGCCGCGC GCGAGGCCGC GCGAAAGGAA GACAAGGCCG GCTGGAAGTT CACGCTGCAC TTCCCGTCGT ATTTCCCGGT GCTGCAATAC GCGCGGAACC GCGCGATGCG CGAGGCGATG TATCGCGCGT ACGTGACGCG CGCGTCCGAG CTCGGCCCGC AGTACGGCGA CGGCAAGGCC GACTGGGACA ACACGACGAT CATCGCGGAT CAGCTCGCGC TGCGCCGCGA AGAGGCGACG ATGCTCGGCT ATCACGACTT CGCCGAAGTG TCGCTCGCGC CGAAGATGGC GGAATCGCCG CAGCAGGTGA TCGCGTTCCT CGAGGATCTC GCGAAGCGCG CGCGCCCGTT CGCGGAAAAA GACTGGGACG AGCTGCGCGC GTTCGCGTCG AGCGAGCTCG GCCTCGCCGC GCTCGAGCCG TGGGACGTCG CGTACGCGGC CGAGAAGCTG CGCGAGCGGC GCTACGCGTT CTCCGAGAAC GAGGTGAAGC AGTATTTCCC CGAGCCGGCG GTGCTCAAGG GGCTTTTCAC GGTCGCCGAG ACGCTGTTCG GCGTGCGGAT CACGCGCGAC GACGCGCCCG TCTGGCATGA GGACGTGCGC TTCTTCCGCG TCGAGAACCG CGACGGCTCG CTCGTCGCGC AGTTCTATCT CGACCTGTAC GCACGCGAAG GCAAGCGCGG CGGCGCGTGG ATGGACGACG CGCGCTCGCG CGCGAAGCGC GGCGACGGCC GCGTGCAGAC GCCCGTCGCG TACCTGACCT GCAACTTCTC CGCGCCGATC GGCGGCAAGC CCGCGTGCTT CACGCACGAC GAAGTAATCA CGCTGTTCCA CGAGTTCGGC CACGGGCTGC ATCACATGCT CACGCGCGTC GACGAGATCG GCGTGTCCGG CATCAACGGC GTCGAATGGG ACGCGGTCGA GCTGCCGTCG CAGTTCATGG AGAACTTCTG CTGGGAGTGG GACGTGCTGA AGTCGATGTC GTCGCACGTC GACACGGGCG ACGCGCTGCC GCGCGCGCTC TTCGACAAGA TGCTCGCCGC GAAGAACTTC CAGAGCGGCC TCGGCACGCT GCGCCAGATC GTGTTCTCGA TGTTCGACAT GCTGCTGCAC GTCGATTTCG ATCCGGCCGG CAAGACGAGC GTCAACGAGT TCGCGCGCGA GATCAACGAG CGCTTCCACG TGATTGCGCA GGCGCCGTTC TCACGCTGGC CGAACACGTT CAGCCACATC TTCGCGGGCG GCTACGCGGC CGGCTACTAC AGCTACAAGT GGGCCGAAGT GCTGTCCGCC GACGCATACG CGGCGTTCGA GGAAGCGGCC GGCTCGGCGG GCAGCGTGCT CGATGCGGCG ACGGGCGCGC GCTATCGGCG CGAGATCCTC GAGGTCGGCG GCAGCCGCCC GGCGATGGAC TCGTTCAAGG CGTTCCGCGG CCGCGAGCCG AACATCGACG CGCTGCTGCG CCACAGCGGG ATGGCCGACG ACGCACAGGC GCGCGCGTAA
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Protein sequence | MSVSANANPL LDFSGLPRFG EIRPEHVTPA LDTLLANAND AVEQAARPDT PATWADVVET IEQATEPLGR AWGVVGHLNA VADTPELRAV YGENLPRVTE FWSSVGQNLA LYEKYKAIAA SPEYAALSAE RKKILDNALR DFRLSGAELP EDRKPRFAQL QEQQAALSKS FSDHVLDATN GYAYYARSED ELAGLPDDAI AAAREAARKE DKAGWKFTLH FPSYFPVLQY ARNRAMREAM YRAYVTRASE LGPQYGDGKA DWDNTTIIAD QLALRREEAT MLGYHDFAEV SLAPKMAESP QQVIAFLEDL AKRARPFAEK DWDELRAFAS SELGLAALEP WDVAYAAEKL RERRYAFSEN EVKQYFPEPA VLKGLFTVAE TLFGVRITRD DAPVWHEDVR FFRVENRDGS LVAQFYLDLY AREGKRGGAW MDDARSRAKR GDGRVQTPVA YLTCNFSAPI GGKPACFTHD EVITLFHEFG HGLHHMLTRV DEIGVSGING VEWDAVELPS QFMENFCWEW DVLKSMSSHV DTGDALPRAL FDKMLAAKNF QSGLGTLRQI VFSMFDMLLH VDFDPAGKTS VNEFAREINE RFHVIAQAPF SRWPNTFSHI FAGGYAAGYY SYKWAEVLSA DAYAAFEEAA GSAGSVLDAA TGARYRREIL EVGGSRPAMD SFKAFRGREP NIDALLRHSG MADDAQARA
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