Gene BMA10247_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1378 
Symbol 
ID4893739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand- 
Start bp1360493 
End bp1361149 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID640150036 
ProductNLP/P60 family protein 
Protein accessionYP_001080926 
Protein GI126451122 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0650104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTCG GCATCCTGAT CGCTGCAGCT CCCGGCGCGT TCGCCGACGA AGTCAGCAGT 
TCCAGTCAGA ATGCGATCAA TTCGGCTCAA TCCGAGCCGG CTTCCTCCTC CTCGAATCTC 
CAACAGGTCA ACGTGCCCGC ACCCGCGAAG AGCCAGGGCG GCGCCAAGGC GTTCCTGTCG 
GGCATGGCCG GCAAAGCGGG CGACGTCGTC GTCGGCGCGC TGAACATGAT CGGCGTGCGC 
TACCGCTGGG GCGGCAACAC GCCGGATTCG GGCCTCGATT GCAGCGGTTT CGTCCGCTAC 
GTGTTCCAGG ACACGCTCGG CATGTCGCTG CCGCGTCGCG CGGAGGAGAT GAGCCGTGTC 
GGCGAGAAGG TGCGCATGAG CGAGCTGAAG CCGGGCGACC TCGTATTCTT CAACACGATG 
CGCCGGACGT TCTCGCACGT CGGCATCTAC ATCGGCGACA ACAAGTTCGT GCACTCGCCG 
TCGACGGGCA GCACGATTCG CGTCGACGAT CTCGATAGCG GCTACTGGGA AAAGCGTTTC 
ACCGGCGCGC GCCGGATCGA GACGCAGTTC TCGACGAAGC CCGACGATCT GCGCCAGCGC 
GTGAAGGCGA CGATCGGCGA CGGCGGCGTC AACGCGAGCG CGAGCGGCAG CAACTAG
 
Protein sequence
MFVGILIAAA PGAFADEVSS SSQNAINSAQ SEPASSSSNL QQVNVPAPAK SQGGAKAFLS 
GMAGKAGDVV VGALNMIGVR YRWGGNTPDS GLDCSGFVRY VFQDTLGMSL PRRAEEMSRV 
GEKVRMSELK PGDLVFFNTM RRTFSHVGIY IGDNKFVHSP STGSTIRVDD LDSGYWEKRF 
TGARRIETQF STKPDDLRQR VKATIGDGGV NASASGSN