Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1364 |
Symbol | dehII-2 |
ID | 4894477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 1350464 |
End bp | 1351267 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640150022 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_001080915 |
Protein GI | 126449965 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0919236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGTGG AGCGCAACGT CATGCCCGGC ACCCCGCCCG CCTTCCCGAA GGCGATTCTC TTCGACGCGT ACGGCACGCT GTTCGACGTG CACGCGGTCG TCGCCGCGGC CGAGCAGCTG TTTCCGGGGC GCGGCGACGC GCTGTCGCAG CTCTGGCGGC GCAAGCAGAT CGAATATTCG CAACTGCGCA CGCTCGCCGA TCCGGCGGGC GGGCGCTATC GGCCGTTCTG GGAGCTGACG CTCGACGCGC TGCGCTTTGC CGCGCGCGCG CTCGGCCTCG CGCTGTCCGC GGCCGCCGAG AAAAGACTGA TGGACGAGTA TGCGTGCCTG TCGACGTACC CGGACACGGT GCCGACGCTG CGCGCGCTGC GTGCGCGCAG CACGCCGCCG AAGCTCGCGA TCCTGTCGAA CGGCAATCCG CAGATGCTCG ATATCGCGGT CAAGAGCGCC GGGATGAGCG GCCTGTTCGA CCGCGTGCTG TCCGTCGACG CGGTTCGCGC GTACAAGCCG TCGCCCGCCG CGTATGCGCT CGGCACCGCG GCGTTCGACG CGGCCCCCGC CGACATCGCA TTCGTGTCGT CGAACGGCTG GGACGTCGCG GGCGCCGGCT GGTTCGGCTA CCGGACCTTC TGGCTGAACC GCACGGGCGC GCCGCTCGAG GAGCTCGGCG CGGCGCCCGC GGGCACGGGC GCCGGCATGG CCGAACTGCT CGCCTTTCTC GACGCGCCGC GCGCCGCCGC GAAAGCGGGC GGCCGAGCGC GCCCGGCGCC CCGCGTAAGC CGCCTCGGCG CGCCGCCGAC CTGA
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Protein sequence | MIVERNVMPG TPPAFPKAIL FDAYGTLFDV HAVVAAAEQL FPGRGDALSQ LWRRKQIEYS QLRTLADPAG GRYRPFWELT LDALRFAARA LGLALSAAAE KRLMDEYACL STYPDTVPTL RALRARSTPP KLAILSNGNP QMLDIAVKSA GMSGLFDRVL SVDAVRAYKP SPAAYALGTA AFDAAPADIA FVSSNGWDVA GAGWFGYRTF WLNRTGAPLE ELGAAPAGTG AGMAELLAFL DAPRAAAKAG GRARPAPRVS RLGAPPT
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