| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1352 |
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| Symbol | thiD |
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| ID | 4893960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 1337955 |
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| End bp | 1338764 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640150010 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001080903 |
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| Protein GI | 126448755 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00443333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAC CGATTCCCAA CGCGCTCACG ATCGCCGGCT CCGATTCGGG CGGCGGCGCC
GGCATCCAGG CCGACCTGAA GACGTTCTCC GCGCTCGGCG CGTACGGCGC GAGCGTGATC
ACCGCGCTCA CCGCGCAGAA CACGCGCGGC GTGACGGGCG TGCATGCGCC CGACGCAGGC
TTCGTGAGCG CGCAGCTCGA TGCGGTATTC GACGACATCC GCATCGACGC GGTGAAGATC
GGCATGCTCG CGAACGCGGC GATCGTGCGT GCGGTCGCGG CGGCGCTCAC GCGCCACGCG
CCGCGCCACG TCGTGCTCGA CACGGTGATG ATCTCGAAGA GCGCGCATGC GTTGCTCGCG
CCCGACGCGG TCGACGCGCT GCGCAACGAA TTGCTGCCGC TCGCCGATCT CGTCACGCCG
AATCTGCCCG AGGCGGCCGC GCTGCTCGGC GTCGCGGCCG CGACGACCGA GGACGACATG
GTGCGCCAGG GCGAGACGCT CGTCGCGCAC GGCGCGAAGG CGGTGCTGAT GAAAGGCGGC
CACCTCGGCG CCGAGCGCGA AAGCCCGGAC TGGCTGATTC ATGCGGGCGG CGCGCAACGC
TTCGCGGGCG CGCGGCTGCC GGTCGCGAAC ACGCACGGCA CCGGGTGCAC GCTGTCGTCG
GCGATCGCCG CGCTGCTGCC GCAGCGGGCG ACGCTCGCGG AGGCGATCGC CGATGCGAAG
ATCTACCTGA TGGGCGCGAT CGGCGCGAGC GGGCAGCTCG ACGTCGGGCA CGGCGTCGGG
CCCGTGCATC ACTTCTATCG ATGGTGGTGA
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| Protein sequence | MTRPIPNALT IAGSDSGGGA GIQADLKTFS ALGAYGASVI TALTAQNTRG VTGVHAPDAG
FVSAQLDAVF DDIRIDAVKI GMLANAAIVR AVAAALTRHA PRHVVLDTVM ISKSAHALLA
PDAVDALRNE LLPLADLVTP NLPEAAALLG VAAATTEDDM VRQGETLVAH GAKAVLMKGG
HLGAERESPD WLIHAGGAQR FAGARLPVAN THGTGCTLSS AIAALLPQRA TLAEAIADAK
IYLMGAIGAS GQLDVGHGVG PVHHFYRWW
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