| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1337 |
|---|
| Symbol | smc |
|---|
| ID | 4894446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1319535 |
|---|
| End bp | 1323143 |
|---|
| Gene Length | 3609 bp |
|---|
| Protein Length | 1202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640149995 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_001080888 |
|---|
| Protein GI | 126448428 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGTGC GGCGCGCGCG CGCGGGCCTT CCGGCCGAAT CGCGGCGCGC AACGCAGGTT
CCGAACCGTT TCACTCTCTT TACCACCGAT ACCGCCGTGC GTCTGAGCTC GATCAAACTC
GCTGGCTTCA AATCTTTCGT CGATCCCACG CACTTCCAGG TTCCAGGTCA ACTGGTCGGC
GTGGTGGGCC CGAACGGGTG CGGCAAGTCC AACATCATCG ACGCCGTGCG CTGGGTGCTC
GGCGAGTCGC GCGCCTCCGA GCTGCGCGGC GAGTCGATGC AGGACGTGAT CTTCAACGGC
TCGACGACGC GCAAGCCCGG CAGCCGGGCG AGCGTCGAGC TGATCTTCGA CAACTCCGAC
GGCCGCGCGG CCGGCCAGTG GGGCCAGTAC GGCGAGATCG CCGTGAAGCG CGTGCTCACG
CGCGACGGCA CGTCGAGCTA TTACATCAAC AATCTGCCCG CGCGGCGCCG CGACATCCAG
GACATCTTCC TCGGCACGGG CCTCGGCCCG CGTGCGTACG CGATCATCGG GCAGGGGATG
ATCGCGCGGA TCATCGAGGC GAAGCCCGAA GAGCTGCGCG TGTTCCTCGA AGAGGCGGCG
GGCGTGTCGA AGTACAAGGA GCGCCGCCGC GAGACCGAGA ACCGGCTGCA CGACACGCGC
GAGAATCTGA CGCGCGTCGA GGACATCGTC CGCGAGCTCG GCGCGAATCT CGAGAAGCTC
GAGGCGCAGG CGGTGGTCGC GACGAAGTAC AAAGAGCTCG TCGCCGACGG CGAGGAGAAG
CAGCGCCTGC TGTGGCTGCT GCGCAAGAAC GAGGCGGCCG CCGAGCAGGA CAGGCAGCGC
CGTGCGATCG GCGACGCGCA GATCGAGCTC GACGCGCAGA CCGCGAAGCT GCGCGAAGTC
GAGGCGCAGC TCGAGACGCT GCGCGTCGCG CACTATTCGG CGAGCGACGC GATGCAGGGC
GCGCAGGGCG CGCTCTACGA GGCGAACGCC GAGGTGAGCC GGCTCGAGGC GCAGATCAAG
TTCATCGTCG AGTCGCGCAA CCGCGTGCAG GCGCAGATCG CCGCGCTCGT CGCGCAGCAG
GAGCAGTGGC GCGCGCAGGC GGACAAGGCG CAGGGCGATC TCGAAGCGGC CGAAGAGGCG
CGCGCGGTCG CCGACGAAAA GGCGGCGATC GCCGAGGACG ACGCGGCCGC GAAGCACGAC
GCGCTGCCCG CGCTCGAGGC GCGCTGGCGC GATGCGCAGA CGGGCCTGAA CGACGAGCGC
GGCCGGATCG CGCAGACCGA ACAGGCGCTG AAGCTCGAAG CCGCGCACCA GCGCAACGCC
GATCAGCAAT TGCAGCAGTT GCAGCAGCGC CACGAGCGCC TGAAGGTCGA GGCGGGCGGC
CTCGACGCGC CGGACGAGGC GCAGCTCGAG GAGTTGCGGA TGCAGCTCGC CGAGCACGAG
GCGATGCTGG CCGACGCGCA GGCGCGCCTC GCCGACGCGC AGGAAGCGCT GCCGCGCCTC
GACGCGCAGC GCCGCGCGGC GCACGAGCGC GTGCAGGCCG AGAGCGCGCA GATCCATCAG
CTCGAAGCGC GTCTCGCCGC GCTCAAGCAG TTGCAGGAAA ACGTGCAGAC GCAGGGCAAG
ATCCAGCCGT GGCTCGACAA GCACGAGCTC GGCGCGCTGC CGCGTCTGTG GAAGAAGCTG
CACGTCGAGG CCGGCTGGGA AACCGCGCTC GAAGCGGTGC TGCGCGAGCG GCTCGCCGCG
CTCGAAGTGT CGAATCTCGA CTGGGTGAAG GCGTTCGCCA CCGACGCGCC GCCCGCGAAG
CTCGCGTTCT ACGCGCCGCC CGCCGCGGGC GAGCCGCTCG CCGCGCCGGG CGCGTTGCGC
CCGCTCCTGC CGCTCGTGCG CATCGACGAC GCGGGCTTGC GCGCGGTGCT CAACGATTGG
CTCGGCACGG TGTTCGTCGC CGACGACCTC GCGCAGGCGC TCGCCGCGCG CATGCAATTG
CCGCAGGGCG GCGCGTTCGT CGTGAAGGCG GGCCACGTCG TCACGCGCTC GGGCGTGCAG
CTCTATGCGG CCGACTCCGA GCAGGCGGGC ATGCTCGCGC GCGCGCAGGA AATCGAGAAC
CTGACGCGCC AGGTGCGCGC GCAGGCGCTC CTGTCCGACG AGGCGAAGGC GGCGGCGATC
CGCGCGGAAG CCGCGCACAC GCAGGCGTCG CAGGCGCTGA CCGAAGTGCG CGCGCAGGCC
GAGCGTGCGA CGCAGCGCGT GCACGCGCTG CAGATGGACG TGCTCAAGCT CACGCAGGCG
CACGAGCGCT ATACGCAGCG CAGCACGCAG ATCCGCGAGG AACTCGAGGA GATCGGCGCG
CAGATCGAGG AGCAGCGTGC GCTGCGCGCG GAGTCGGAGG CGAATTTCGA GCGCCACGAC
GCCGAGCTCG CCGAATTGCA GGCGCGCTTC GAGGACAATC AGCTCGCGTT CGAATCGCTC
GACGAGACGC TGACGAACGC GCGCCAGGAG GCGCGCGAGC GCGAGCGCGC GGCCACCGAC
GCGCGCTTCG CCGCGCGCCA GTCCGCGAAC CGCATCGACG AGCTGAAGCG CTCGATCCAG
GTCGCGCACG AGCAGGCCGA GCGCGTCGCG GCGTCGCTCG AGGATGCGCG CGCGGAGCTC
GAGACGATCA ACGAGCAGAC CGCGCACACC GGCCTGCAGG ACGCGCTCGA AGTGCGCGCG
GCGAAGGAGC AGGCGCTCGG CGCCGCGCGC GCGGAGCTCG ACGATCTCAC GGCGAAGCTG
CGCGCGGCCG ACGAGGCGCG GCTCGCCGCC GAGCGCTCGC TGCAGCCGCT GCGCGATCGC
ATCACCGAGC TGCAACTGAA GGAGCAGGCG GCGCGTATGA CGGGCGAGCA GTTCGCCGAG
CAGCTCGCGA CGGCCGAGGT CGACGAGGCC GCGCTGAAGG AAAAGCTCAT GCCGGACATG
AAGCCGTCGT ACCTGCAGGG CGAGGTCACG CGGATCAACA ACGCGATCAA CGCGCTCGGC
CCGGTCAACA TGGCGGCGCT CGACGAGCTC GCGGCCGCGA GCGAGCGCAA GGTGTTCCTC
GATGCGCAAT CGGCCGATCT GACGAACGCG ATCGAGACGC TCGAGGACGC GATCCGCAAG
ATCGACCAGG AAACGCGCGC GCTCCTGCAG GCGACCTTCG ACGAAGTGAA CCGCCATTTC
AGCGATCTGT TCCCGCGCCT GTTCGGCGGC GGGCAGGCGA AGCTCATCAT GACGGGCGAC
GAGATTCTCG ACGCCGGCGT GCAGGTGATG GCGCAGCCGC CCGGCAAGAA GAACGCGACG
ATTCACCTGC TGTCGGGCGG CGAGAAGGCG CTGACGGCGA CCGCGCTCGT GTTCGCGATG
TTCCAGCTGA ATCCGGCGCC GTTCTGCCTG CTCGACGAGG TCGACGCGCC GCTCGACGAC
GCGAACACCG AGCGCTTCGC GAATCTCGTG CGCGCGATGT CCGACAAGAC GCAGTTCCTT
TTCATCTCGC ACAACAAGAT CGCGATGGAG ATGGCGCAGC AACTGATCGG CGTGACGATG
CAGGAGCAGG GCGTATCGCG GATCGTCGCG GTCGACATGG AAACGGCCGC GGGTTTTGCC
CAGAATTGA
|
|---|
| Protein sequence | MGVRRARAGL PAESRRATQV PNRFTLFTTD TAVRLSSIKL AGFKSFVDPT HFQVPGQLVG
VVGPNGCGKS NIIDAVRWVL GESRASELRG ESMQDVIFNG STTRKPGSRA SVELIFDNSD
GRAAGQWGQY GEIAVKRVLT RDGTSSYYIN NLPARRRDIQ DIFLGTGLGP RAYAIIGQGM
IARIIEAKPE ELRVFLEEAA GVSKYKERRR ETENRLHDTR ENLTRVEDIV RELGANLEKL
EAQAVVATKY KELVADGEEK QRLLWLLRKN EAAAEQDRQR RAIGDAQIEL DAQTAKLREV
EAQLETLRVA HYSASDAMQG AQGALYEANA EVSRLEAQIK FIVESRNRVQ AQIAALVAQQ
EQWRAQADKA QGDLEAAEEA RAVADEKAAI AEDDAAAKHD ALPALEARWR DAQTGLNDER
GRIAQTEQAL KLEAAHQRNA DQQLQQLQQR HERLKVEAGG LDAPDEAQLE ELRMQLAEHE
AMLADAQARL ADAQEALPRL DAQRRAAHER VQAESAQIHQ LEARLAALKQ LQENVQTQGK
IQPWLDKHEL GALPRLWKKL HVEAGWETAL EAVLRERLAA LEVSNLDWVK AFATDAPPAK
LAFYAPPAAG EPLAAPGALR PLLPLVRIDD AGLRAVLNDW LGTVFVADDL AQALAARMQL
PQGGAFVVKA GHVVTRSGVQ LYAADSEQAG MLARAQEIEN LTRQVRAQAL LSDEAKAAAI
RAEAAHTQAS QALTEVRAQA ERATQRVHAL QMDVLKLTQA HERYTQRSTQ IREELEEIGA
QIEEQRALRA ESEANFERHD AELAELQARF EDNQLAFESL DETLTNARQE ARERERAATD
ARFAARQSAN RIDELKRSIQ VAHEQAERVA ASLEDARAEL ETINEQTAHT GLQDALEVRA
AKEQALGAAR AELDDLTAKL RAADEARLAA ERSLQPLRDR ITELQLKEQA ARMTGEQFAE
QLATAEVDEA ALKEKLMPDM KPSYLQGEVT RINNAINALG PVNMAALDEL AAASERKVFL
DAQSADLTNA IETLEDAIRK IDQETRALLQ ATFDEVNRHF SDLFPRLFGG GQAKLIMTGD
EILDAGVQVM AQPPGKKNAT IHLLSGGEKA LTATALVFAM FQLNPAPFCL LDEVDAPLDD
ANTERFANLV RAMSDKTQFL FISHNKIAME MAQQLIGVTM QEQGVSRIVA VDMETAAGFA
QN
|
|---|
| |