Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1320 |
Symbol | |
ID | 4892068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1301602 |
End bp | 1302993 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640149979 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001080872 |
Protein GI | 126449436 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0767878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTGC TGGTCGAACT GATCGCGTTT GCTGTGGCGA TCGGCGTGCT GGTCGTCGTG CATGAGTACG GGCATTACCG CGTCGCGCGC TGGTGCGGCG TCAAGGTGCT GCGTTTCTCG ATCGGCTTCG GCGCGCCCGT CGCGCGCTGG GTCAGCAAGA AGACGGGCAC CGAGTGGACG CTGTCCGCGC TGCCGCTCGG CGGCTACGTG AAGATGCTCG ACGAGCGGGA CCCCGGCGAC GGCATTCGCG CGGACGAGCT GCCGCATGCA TTCAACCGGC AGCCGGTCGG CAAGCGGATC GCGATCGCCG CGGCCGGGCC GGTCGCGAAC TTCCTGCTCG CGATCGCGCT CTTCTCGGCC GTGTTCGCGA CCGGCGTGAC GGAGCCCGCG GCGATCGTCG CGCCGCCCGC GGCCGGCACG CCCGCCGCGG TCGCGGGCTT TGACGGCGGC GAGACGATCG TGTCGATCCG CATCCCGGGC GCGGGCGGCG CGCAAGGAGG ACAGGCCGAG CCGGTGCGCT CGTGGTCCGA GCTGCGCTGG AAGCTGCTCG GCGCGGCGTT CGACCACAGG GACGTCGTGC TCGGCGCGCG CAACCGCGCG GACGGCGCCA CCTACGATTT TCGCGTCGAT CTGCACGGCA TCGCCGATCG CGACGTCGAC GACGATTTCA TGTCGCGCCT CGGCTTCGAG CCGGGCGGCG GATCGCTGAC GGTGACGTCG GTGCTGCCGG GCGGCGCCGC GCAACGGGCG GGGCTTCAGG CGGGCGACAA GCTCGTGGCG CTCGACGGCG CGCGCATCGG CGGCTCGACG CGCTTCATCG ACGACGTGAA GGCGCACGCG GGCCGCGCAC TCGCGCTGCG CATCGAGCGC GCGGGTGCCG AGCGCACGGT GTCGATCGTG CCGCAGGCGC AGCGCGACGA CGAGACGGGC AAGCAGGTGG GCCGCATCGG CGCGGCGCTC GCGCTGCAGA CGCCGAGCGT GGACGTGCGC TACGGCGTAC TCGAGAGCGT CGAGCTCGGC GCGCGGCGCA CGTGGGACAT TTCGGTGTAT TCGCTGAAGA TGTTCGGCAG GATGGTGACG GGCGAGGCGT CGCTGAAGAA CCTGTCCGGC CCGGTGACGA TCGCCGATTA CGCGGGCAAG AGCGCGCGGC TCGGTTTGTC GGCTTTCCTA TCGTTTCTCG CCCTTGTCAG CATTAGCCTC GGCGTGCTGA ACTTGCTGCC GATTCCCGTT TTGGACGGGG GGCATCTGTT ATATTATCTG GTTGAAGCCG CGACCGGCAA GGCCGTATCG GAGCGCTGGC AACTGATTCT GCAAAGAGCG GGGTTGATCT GCATCGTCGC GTTGTCGGCG ATCGCGCTGT TCAACGATCT GGCTCGGTTA ATCCATTTTT GA
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Protein sequence | MNVLVELIAF AVAIGVLVVV HEYGHYRVAR WCGVKVLRFS IGFGAPVARW VSKKTGTEWT LSALPLGGYV KMLDERDPGD GIRADELPHA FNRQPVGKRI AIAAAGPVAN FLLAIALFSA VFATGVTEPA AIVAPPAAGT PAAVAGFDGG ETIVSIRIPG AGGAQGGQAE PVRSWSELRW KLLGAAFDHR DVVLGARNRA DGATYDFRVD LHGIADRDVD DDFMSRLGFE PGGGSLTVTS VLPGGAAQRA GLQAGDKLVA LDGARIGGST RFIDDVKAHA GRALALRIER AGAERTVSIV PQAQRDDETG KQVGRIGAAL ALQTPSVDVR YGVLESVELG ARRTWDISVY SLKMFGRMVT GEASLKNLSG PVTIADYAGK SARLGLSAFL SFLALVSISL GVLNLLPIPV LDGGHLLYYL VEAATGKAVS ERWQLILQRA GLICIVALSA IALFNDLARL IHF
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