| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1314 |
|---|
| Symbol | lpxB |
|---|
| ID | 4893873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1294928 |
|---|
| End bp | 1296094 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640149972 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001080865 |
|---|
| Protein GI | 126448965 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00556286 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCC AACTCACACC GCTGCGCGTC GCGCTCGTCG CGGGCGAGCC GTCGGGTGAT
CTGCTCGGCG CGTCGCTCCT CGGCGGGCTG CATGCGCGGC TGCCCGCGTC GTCCCGCTAC
TACGGGATCG GCGGGCCGCG CATGAGCGCC GTGGAATTCG ATGCGCACTG GCCGATGGAA
AAGCTCGCGG TGCGCGGCTA CGTCGAGGCG CTCAAGCACA TCCCCGAGAT CCTGCGCATT
CGCGGCGAAC TCAAGCGCCA GTTGTTCGCC GAGCCGCCCG ACGCATTCGT CGGCATCGAC
GCGCCCGATT TCAACTTCGG CCTCGAGCAG GCGTTGCGCG GCGCCGGCAT TCCGACGATC
CACTTCGTCT GCCCGTCGAT CTGGGCATGG CGCGGCGGCC GGATCAAGAA GATCGTCAAG
GCCGTCGACC ACATGCTGTG CCTGTTCCCG TTCGAGCCCG AACTGCTCGA GAAGGCGGGC
GTCGCGGCGA CGTTCGTCGG CCATCCGCTG GCCGACGAGA TTCCGCTCGA GCCCGATACG
CACGGCGCGC GGATCGCGCT CGGGCTGCCG GGCGGGGGGC CCGTGATCGC GGTGCTGCCG
GGCAGCCGCC GCTCGGAGAT CGAGTTGATC GGCCCGACAT TCTTCGACGC GATGGAACTG
ATGCAGCAGC GCGAGCCCGG CGTGCGCTTC GTCGTGCCGG CCGCGACGCC CGCGCTGCGC
GCGTTGCTGC AGCCGCTCGT CGACGCGCAT CCGTCGCTGT CGGTTACGCT GACCGAGGGG
CGCGCGCAGG TCGCGATGAC GGCGGCCGAC GCGATCCTCG TGAAAAGCGG CACGGTGACG
CTCGAAGCGG CGCTGCTCAA GAAGCCGATG GTGATTTCGT ACAAGGTGCC ATGGCTCACC
GGGCAGATCA TGCGCCGGCA GGGCTATCTG CCGTACGTCG GCCTGCCGAA CATTCTCGCG
GGCCGCTTCG TCGTGCCCGA GCTGCTGCAG CATTTCGCGA CGCCCGACGC GCTCGCCGAC
GCGACGCTCA CGCAACTGCG CGACGATGCG AACCGTCGCG CGCTCGCCGA CATTTTCACC
GACATGCATC TCGCGTTGCG CCAGAATACC GCGCAGCGCG CGGCCGAGGC CGTCGCGCAC
GTGATCGACA GCAGGAAGCC GCGCTGA
|
|---|
| Protein sequence | MAFQLTPLRV ALVAGEPSGD LLGASLLGGL HARLPASSRY YGIGGPRMSA VEFDAHWPME
KLAVRGYVEA LKHIPEILRI RGELKRQLFA EPPDAFVGID APDFNFGLEQ ALRGAGIPTI
HFVCPSIWAW RGGRIKKIVK AVDHMLCLFP FEPELLEKAG VAATFVGHPL ADEIPLEPDT
HGARIALGLP GGGPVIAVLP GSRRSEIELI GPTFFDAMEL MQQREPGVRF VVPAATPALR
ALLQPLVDAH PSLSVTLTEG RAQVAMTAAD AILVKSGTVT LEAALLKKPM VISYKVPWLT
GQIMRRQGYL PYVGLPNILA GRFVVPELLQ HFATPDALAD ATLTQLRDDA NRRALADIFT
DMHLALRQNT AQRAAEAVAH VIDSRKPR
|
|---|
| |