| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1284 |
|---|
| Symbol | ldcA |
|---|
| ID | 4892027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 1267978 |
|---|
| End bp | 1268919 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640149942 |
|---|
| Product | L,D-carboxypeptidase A |
|---|
| Protein accession | YP_001080835 |
|---|
| Protein GI | 126449558 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.017438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA CGCCCTGCAC GCCGCGCACG ATTCGTCTGC TTGCCCCGTC CGGTTATCCG
CACGATCCCG CCGCGATCGA GCGCGCGCTC GAACGCCTGA GCGACGAGCA GCATCGAATC
CAGAATCTCG ACGCGACGCA ACGCCGCTAT CAGCGCTTCG CCGGCACCGA CGGCGAGCGG
GCAGGCGACC TGAACCGGCT TGCGGACCCG TCGTTGCCGC TGCCCGACAT CGGCCTCGCG
GTGCGCGGCG GCTACGGCGC CGCGCGGATC CTGCACGGGC TCGACTATCG CGGCCTCGAA
CGCCGGCTGC GCGACCAGCC GATCGCGCTC GTCGGCCACA GCGACTTCAC CGCGATCCAG
CTCGCGCTCT ATGCGAAGGC GCGCGTGAAG ACGTTCGGCG GCCCGATGCT GTCGGCCGAT
TTCGGCGCGC CGACGCCGAG CGAGTTCACG CTTGCGCATT TCTGGCAGAC CCTCACGCAG
CCGACGACGA CGATCGTCTC CGACGTGCCG CAGACGCAGG TCGTCAACGC ATCGGGCACG
CTATGGGGCG GCAATCTCGC GATCCTCGCG TCGCTCGTCG GCACGCCGTA CATGCCGCAG
ATCGAAGGGG GGATCCTGTT CGTCGAGGAT GTGAACGAGC AGCCGTTCAG GATCGAGCGG
ATGATCTATC AGCTGCATCT CGCGGGCATC CTCGCACGCC AGCAGGCGCT CGTGCTCGGC
CAGTTCACGG GCGCGCGCCC GTTCGATTAC GACAACGGCT ACGACATGCA GGCGATGATC
GAGCAGGTGC GCGGCGTGAT CGGCATCCCG ATCGTCACCG GGTTGCAGTT CGGTCACGTG
CCCGATCTGC TGACGCTGCC GTTCGGCGCG CGCGCGGAGC TCGTCGCGAA CGAGCACGGT
TTCAGGCTGA CGATGTCCGA CTATCCGCAT CTCGCCGCAT GA
|
|---|
| Protein sequence | MISTPCTPRT IRLLAPSGYP HDPAAIERAL ERLSDEQHRI QNLDATQRRY QRFAGTDGER
AGDLNRLADP SLPLPDIGLA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ
LALYAKARVK TFGGPMLSAD FGAPTPSEFT LAHFWQTLTQ PTTTIVSDVP QTQVVNASGT
LWGGNLAILA SLVGTPYMPQ IEGGILFVED VNEQPFRIER MIYQLHLAGI LARQQALVLG
QFTGARPFDY DNGYDMQAMI EQVRGVIGIP IVTGLQFGHV PDLLTLPFGA RAELVANEHG
FRLTMSDYPH LAA
|
|---|
| |