| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1279 |
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| Symbol | |
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| ID | 4893521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | - |
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| Start bp | 1261953 |
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| End bp | 1262906 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640149937 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_001080830 |
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| Protein GI | 126448268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.414457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCG ATCCCAACTA TCCACGCGAT CTGATCGGCT ACGGCCGACA TCCGGTGCAG
GCGAACTGGC CGGGCCGCGC GCGCGTCGCG GTGCAGTTCG TGCTCAACTA CGAGGAAGGC
GGCGAGAACT GCGTGCTGCA CGGCGACCCC GCCTCCGAGC AGTTCCTGTC CGAGATCGTC
GGCGCGGCCG CGTATCCGGC GCGCCACATG AGCATGGAGT CGATCTACGA ATACGGCTCG
CGCGCGGGCG TGTGGCGCAT CCTGCGCGAG TTCGACAAGC GCGGGCTGCC GCTCACGGTG
TTCGGCGTCG GCATGGCGAT CGAGCGGCAT CCGGAGCTCG CGCGCGCGTT CGTCGAGCTC
GGCCACGAGA TCGCGTGTCA CGGCTGGCGC TGGATTCACT ATCAGGACAT GACGCCCGAG
CACGAAGCCG AGCACATGCG GCTCGGAATG GAGGCGATCG AGCGCGTGAC GGGCGTGCGC
CCGCTCGGCT GGTATACGGG CCGCGACAGT CCGAACACGC ATCGGCTCGT CGCCGAGTAC
GGCGGCTTCC TGTACGACTC CGATCATTAC GGCGACGATC TGCCGTTCTG GATGGACGTC
GAGGTGTCGG GCGGCGCGAG CGTGCCGCAA CTGATCGTCC CGTACACGCT CGACGCGAAC
GACATGCGTT TCGCGACGCC GCAGGGCTTC AACACCGCCG ATCATTTCTT CCACTATCTG
CGCGACGCGT TCGACGTGCT GTACGAGGAA GGCGACGAAG CGCCCAAGAT GATGTCGATC
GGCATGCACT GCCGCCTGCT CGGCCGGCCG GGGCGCTTTC GCGCGCTGCA GCGCTTTCTC
GATCACATCG AGCGGCACGA TCGCGTGTGG GTCGCGCGCC GCGTCGAGAT CGCGCGGCAC
TGGCGCGAGC ATCATCCGTA TCGGCCGCAC GCCCGGCGCG AGGGGGACGC ATGA
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| Protein sequence | MAFDPNYPRD LIGYGRHPVQ ANWPGRARVA VQFVLNYEEG GENCVLHGDP ASEQFLSEIV
GAAAYPARHM SMESIYEYGS RAGVWRILRE FDKRGLPLTV FGVGMAIERH PELARAFVEL
GHEIACHGWR WIHYQDMTPE HEAEHMRLGM EAIERVTGVR PLGWYTGRDS PNTHRLVAEY
GGFLYDSDHY GDDLPFWMDV EVSGGASVPQ LIVPYTLDAN DMRFATPQGF NTADHFFHYL
RDAFDVLYEE GDEAPKMMSI GMHCRLLGRP GRFRALQRFL DHIERHDRVW VARRVEIARH
WREHHPYRPH ARREGDA
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