Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1138 |
Symbol | clpB |
ID | 4892228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 1131309 |
End bp | 1133906 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640149796 |
Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
Protein accession | YP_001080692 |
Protein GI | 126448469 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.118754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATCG ACAAGCTCAC CACCAAATTC CAAGAGGCGC TCTCGGATGC GCAGAGTTTC GCCGCCGGGC GCGACAACCA GTACATCGAA CCCGTCCACG TGCTGGCCGC GCTCGTCGCG CAGCAGGACG GCTCCGCGCG CTCGCTGCTG TCGCGTGCGG GCGTGCACAT CCAGGCGTTG CAAGGCGCGC TCAACGAAGC GATCTCGCGC CTGCCGCAGG TGACGGGCAC GGGCGGCGAC ATCCAGGTCG GCCGTGAACT CGCGGGCCTG CTGAACCAGG CCGACAAGGA AGCGCAGAAA CTGAACGACA CGTTCGTCGC GAGCGAGATG TTCCTGCTCG CGGTGGCCGA CGACAAGGGC GAAGCCGGCA AGCTCGCGCG CCAGCACGGC CTCACGCGCC GCGCGCTCGA ATCCGCGATC GCCGCGGTGC GCGGCGGCTC GCAGGTGCAC AGCCAGGATG CCGAGAGCCA GCGCGAGGCG CTGAAGAAAT ACACGGTCGA TCTGACCGAG CGCGCGCGCG CGGGCAAGCT CGATCCGGTG ATCGGCCGCG ACGACGAGAT TCGCCGCTCG ATCCAGATCC TGCAGCGCCG CACGAAGAAC AATCCGGTGC TGATCGGTGA GCCGGGCGTC GGCAAGACCG CGATCGTCGA AGGGCTCGCG CAGCGGATCG TCAACGGCGA GGTGCCCGAG ACGCTGAAGA ACAAGCGCGT GCTGTCGCTC GACATGGCGG CGCTGCTCGC CGGCGCGAAG TATCGCGGCG AGTTCGAGGA GCGTCTGAAG GCGGTGCTCA ACGACATCGC GAAGGACGAG GGCCGCACGA TCGTCTTCAT CGACGAGATC CATACGATGG TCGGTGCGGG CAAGGCCGAA GGCGCGATGG ACGCGGGCAA CATGCTCAAG CCCGCGCTGT CGCGCGGCGA GCTGCACTGC ATCGGCGCGA CGACGCTCGA CGAATACCGC AAGTACATCG AGAAGGATGC CGCGCTCGAG CGCCGCTTCC AGAAGGTGCT CGTCGACGAG CCGAGCGTCG AGGCGACGAT CGCGATCCTG CGCGGGCTGC AGGAGAAGTA CGAACTGCAT CACGGCGTCG AGATCACCGA TCCGGCGATC GTCGCCGCGG CGGAACTCTC GCACCGCTAC ATCACCGACC GCTTCCTGCC CGACAAGGCA ATCGATCTGA TTGACGAGGC CGCGTCGAGG ATCAAGATGG AAATCGACTC GAAGCCCGAA GAAATGGACA AGCTCGATCG CCGTCTGATC CAGTTGAAGA TCGAGCGCGA AGCGGTGAAG AAGGAGCCGG ACGAAGCGTC GCAGAAGCGT CTTGCGCTGA TCGAGGAGGA AATCGAGCGG CTCGGGCGCG AATACGCGGA TCTCGACGAG ATCTGGACGG CCGAGAAGGC AGCCGTGCAG GGCAGTGCGC AACTGAAGGA AGAGATCGAC AAGGTGCGTG CCGACATTGC GCGCCTGCAG CGCGAAGGCA AGCTCGAGAA GGTCGCCGAG CTGCAGTACG GCAAGCTGCC GCAACTCGAG GCGCGGCTCA AGCAGGTCAC GCAGGCCGAG GAGAGCGAGC AGCACAATCC GACGCGGCCG CGCCTGCTGC GCACGCAGGT CGGCGCGGAG GAAATTGCCG AGGTCGTCTC GCGCGCGACG GGCATTCCGG TGTCGCGGAT GATGCAGGGC GAGCGCGAGA AGCTGCTGCA CATCGAAGAG AAGCTGCATG AGCGCGTGGT CGGCCAGAAC GAGGCGATCG ACGCGGTCGC CGACGCGATC CGCCGCTCGC GCGCGGGCCT CGCCGATCCG AACCGTCCGT ACGGCTCGTT CCTGTTCCTC GGCCCGACGG GCGTGGGCAA GACCGAGCTG TGCAAGGCGC TCGCCGGCTT CCTGTTCGAT TCGGAAGAGC ATCTGATCCG CATCGACATG AGCGAGTTCA TGGAGAAGCA CAGCGTCGCG CGGCTGATCG GCGCGCCGCC CGGCTACGTC GGCTACGAGG AAGGCGGCTA TCTGACCGAA GCCGTGCGTC GCAAGCCGTA CAGCGTGATC CTGCTCGACG AGATCGAGAA GGCGCACCCG GACGTGTTCA ACGTGCTGCT GCAGGTGCTC GACGACGGCC GGATGACGGA CGGGCAGGGG CGCACCGTCG ACTTCAAGAA CACCGTGATC GTGATGACGT CGAATCTCGG CTCGCAGCTG ATCCAGTCGA TGTCGGGCTC GTCGCAGGAA GAGATCAAGG ATGCGGTGTG GGTCGAGGTC AAGCAGCACT TCCGCCCCGA GTTCCTGAAC CGGATCGACG ACGTCGTCGT GTTCCACTCG CTCGACCGCG GCAACATCCA GGCGATCGCG AAGATTCAGC TCGCGCGTCT GCACGACCGG CTCGCGAAGC TCGACATGGC GCTCGACGTG TCGGAGGCCG CGCTCGAGCA GATCGGCAAG GTCGGCTACG ATCCGCTGTT CGGTGCGCGG CCGCTCAAGC GCGCGATCCA GCAGGAGATC GAGAATCCGG TCGCGAAGCT GATCCTCGCG GGCCGCTTCG GGCCGAAGGA CGTGATTCCG GTCGACATGC AGGACGGCAG GTTCGTGTTC GAGCGCGTCG TGCATTGA
|
Protein sequence | MRIDKLTTKF QEALSDAQSF AAGRDNQYIE PVHVLAALVA QQDGSARSLL SRAGVHIQAL QGALNEAISR LPQVTGTGGD IQVGRELAGL LNQADKEAQK LNDTFVASEM FLLAVADDKG EAGKLARQHG LTRRALESAI AAVRGGSQVH SQDAESQREA LKKYTVDLTE RARAGKLDPV IGRDDEIRRS IQILQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE TLKNKRVLSL DMAALLAGAK YRGEFEERLK AVLNDIAKDE GRTIVFIDEI HTMVGAGKAE GAMDAGNMLK PALSRGELHC IGATTLDEYR KYIEKDAALE RRFQKVLVDE PSVEATIAIL RGLQEKYELH HGVEITDPAI VAAAELSHRY ITDRFLPDKA IDLIDEAASR IKMEIDSKPE EMDKLDRRLI QLKIEREAVK KEPDEASQKR LALIEEEIER LGREYADLDE IWTAEKAAVQ GSAQLKEEID KVRADIARLQ REGKLEKVAE LQYGKLPQLE ARLKQVTQAE ESEQHNPTRP RLLRTQVGAE EIAEVVSRAT GIPVSRMMQG EREKLLHIEE KLHERVVGQN EAIDAVADAI RRSRAGLADP NRPYGSFLFL GPTGVGKTEL CKALAGFLFD SEEHLIRIDM SEFMEKHSVA RLIGAPPGYV GYEEGGYLTE AVRRKPYSVI LLDEIEKAHP DVFNVLLQVL DDGRMTDGQG RTVDFKNTVI VMTSNLGSQL IQSMSGSSQE EIKDAVWVEV KQHFRPEFLN RIDDVVVFHS LDRGNIQAIA KIQLARLHDR LAKLDMALDV SEAALEQIGK VGYDPLFGAR PLKRAIQQEI ENPVAKLILA GRFGPKDVIP VDMQDGRFVF ERVVH
|
| |