Gene BMA10247_1082 details

Gene Information

• Locus tag: BMA10247_1082
• Symbol: phbC-2
• ID: 4891863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10247
• Kingdom: Bacteria
• Replicon accession: NC_009080
• Strand: -
• Start bp: 1075863
• End bp: 1077677
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640149740
• Product: poly-beta-hydroxybutyrate polymerase
• Protein accession: YP_001080636
• Protein GI: 126449482
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3243] Poly(3-hydroxyalkanoate) synthetase
• TIGRFAM ID: [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.226375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACAGT TGTTCGAGTC CTGGCTCGGC GCGTGGCGCA GCTTCGCGGA CCCGGCCCGG 
GCGGCCGCGG GCGACGCACC GTCGCCGTCG CCGTCGCCGT TCGCGGCGTT CCAGCCGCCG 
CAGCCGTTTG CGTTCGCGAT GCCTGCGATG CCGCCGATGC CGCCGATGCC GGATTGGTCC 
GGCGCGGCCG CGTCGTTCGC GGGGCTCGCG CCCGTCGCGT CGGTGCCGCC CGCGCGGCTG 
CAGAAGCTGC AGGCCGATTA TTCGCGCGAT TGCCTCGCGC TGATCCAGCA GGCGAGCGCC 
GCGACGCCGA CCGTTCCCGA GCTGAAGGAC CGGCGTTTCA GCGCGGACGC CTGGAAGGCT 
TCACCCGCGC ACGGGTTCGC GGCCGCCTGG TATCTGCTGA ACGCGCGCTA CCTGCAGGAG 
CTCGCCGACG CGCTCGAGAC CGACCCGAAG ACGCGCGAGC GGATCCGCTT CACGGTCCAG 
CAGTGGACGG CCGCCGCGTC GCCGAGCAAC TTCCTCGCGC TCAATCCGGA GGCGCAGAAG 
AATCTCGTCG AGACGCAGGG CGAGAGCCTG CGTCTCGGGA TGATGAACCT GCTCGCCGAC 
ATGCAGCGCG GCAAGATTTC GCAGACGGAC GAATCGCAAT TCGTCGTCGG CAAGAATCTC 
GCGGTGACGC CGGGCGCGGT CGTCTACGAG AACGATCTGA TCCAGTTGAT CCAGTACACG 
CCCACGACAG CCACCGTCTT CGAGCGGCCG CTGCTCATCG TGCCGCCGTG CATCAACAAG 
TTCTACATCC TCGATCTGCA GCCGGAGAAT TCGCTCGTCG CGCACGCGCT GTCGTGCGGC 
CATCAGGTGT TCCTCGTGTC GTGGCGCAAT GCCGACGCGT CGGTCGCGCA CAAGACGTGG 
GACGACTACA TCGACGAGGG CCTGCTCGCC GCGATCGACG TCGTCCAGCA GGTGAGCGGG 
CGCGAGCAGA TCAACACGCT CGGCTTCTGC GTCGGCGGCA CGATGCTTGC GACGGCGCTC 
GCGGTGCTCG CCGCGCGCGG CGAGCACCCG GCCGCGTCGA TGACGCTGCT CACCTCGATG 
CTCGACTTCT CCGACACGGG CATTCTCGAC GTGTTCGTCG ACGAGGCGCA CGTGCAGATG 
CGCGAGCAGA CCATCGGCGG CAAGGGCGGC GCGCCCGCGG GCTTGATGCG CGGCGTCGAG 
TTCGCGAACA CGTTTTCGTT TCTGCGTCCG AACGATCTCG TGTGGAACTA TGTCGTCGAC 
AACTACCTGA AGGGCCGCAC GCCCGCGCCG TTCGATCTGC TGTACTGGAA CGGCGATTCG 
ACGAGCCTGC CCGGCCCGAT GTACGCGTGG TATCTGCGGA ATACCTATCT CGAAAACAAG 
CTGCGCGAGC CGGATGCGCT CACGGTGTGC GGCGAGCCCG TCGATCTGTC GCGCATCGAC 
GTGCCGACGT TCATCTACGG CTCGCGCGAG GATCACATCG TGCCGTGGCA GACCGCGTAC 
GCGTCGACGT CGCTGCTGAC GGGGCCGCTG AAGTTCGTGC TGGGCGCGTC GGGCCACATC 
GCAGGCGTGA TCAATCCGCC CGCGAAGCGC AAGCGCAGCT ACTGGAGCTA CGGCGCGAGC 
GCGAAGGAGC TGCCGGAATC GGCGAACGAC TGGCTCGATG CGGCCGTCGA ACACCCTGGC 
AGTTGGTGGC CGGTATGGAT TGAGTGGCTC GATCAGTACG GCGGCAAGAA GGTGAAGCCG 
CGCGCGCACC TCGGCTGCGC GCGCTTCCCG GTGATCGAGC CCGCGCCCGG CCGATATGTG 
TTGCAACGCG ATTGA 

 

Protein sequence

MQQLFESWLG AWRSFADPAR AAAGDAPSPS PSPFAAFQPP QPFAFAMPAM PPMPPMPDWS 
GAAASFAGLA PVASVPPARL QKLQADYSRD CLALIQQASA ATPTVPELKD RRFSADAWKA 
SPAHGFAAAW YLLNARYLQE LADALETDPK TRERIRFTVQ QWTAAASPSN FLALNPEAQK 
NLVETQGESL RLGMMNLLAD MQRGKISQTD ESQFVVGKNL AVTPGAVVYE NDLIQLIQYT 
PTTATVFERP LLIVPPCINK FYILDLQPEN SLVAHALSCG HQVFLVSWRN ADASVAHKTW 
DDYIDEGLLA AIDVVQQVSG REQINTLGFC VGGTMLATAL AVLAARGEHP AASMTLLTSM 
LDFSDTGILD VFVDEAHVQM REQTIGGKGG APAGLMRGVE FANTFSFLRP NDLVWNYVVD 
NYLKGRTPAP FDLLYWNGDS TSLPGPMYAW YLRNTYLENK LREPDALTVC GEPVDLSRID 
VPTFIYGSRE DHIVPWQTAY ASTSLLTGPL KFVLGASGHI AGVINPPAKR KRSYWSYGAS 
AKELPESAND WLDAAVEHPG SWWPVWIEWL DQYGGKKVKP RAHLGCARFP VIEPAPGRYV 
LQRD