| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_1058 |
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| Symbol | potF |
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| ID | 4893859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | - |
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| Start bp | 1049186 |
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| End bp | 1050640 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640149716 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | YP_001080612 |
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| Protein GI | 262193268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.363669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACGGCC GGGCGGCGGG CGCGGCGTTC GGACGGGCGG GCGCGCGTCC TCCTACCCGG
AACGACGAAC GGGCGCCGCC TGAATTTAGG GTAGGTGATC CGTTCGGCCC GCGCGGGCTT
TTTTCAGGAT GGACACGGGC CGATAACCCG ATAAAATTGC GCCCACCTGC CGCGTCGCGA
CGCCCCGCGC CGTGCAATCG AAAAGTGCGA ATGTGTTCCG TTTGTGCGAC AACGGCGGGA
AATTTTTGTG GCGGGGACGG ATTAGTGGTA GCTTTCGGGG TTTTCAAGGG GCGGCGCGAA
ACGACGCGCC GCAGTGGCGA GGCTGACGGC GATCGAATCG GTTCGATCAG GGAGAACGGG
ATGAAGGCAA AGGTGGCGGG CCGGTTGACG GCACTTGCGC TCTGCGCGGG CGCGACGGTG
GCGGCGGCGA AGGATACGCA GCTCAACGTC TATAACTGGT CGGACTACAT TGCGAAGGAC
ACGATCCCGA ACTTCGAGAA GCAGACGGGC GTCAAGGTCC GCTACGACAA CTACGACAGC
GACGACACGC TGCAGGCGAA GCTTTTGACC GGCAACTCGG GCTACGACAT CGTCGTGCCG
ACGGGCAACT ACGCGGGCAA GCAGATCCAG GCCGGCATCT TCACGCCGCT CGACAAGTCG
AAGCTGCCGA ACCTCAAGTA TCTCGATGCG CAACTGATGG CGCTCGTCGC GGGCGCCGAT
CCGGGCAACA AGTACGTGGT GCCCTGGGCA TATGGCACGA CGGGCCTCGG CTACAACGTC
GACAAGGCGC AGAAGGTGCT CGGCAAGGTG CCGCTCGACA ACTGGGACAT CCTGTTCAAG
CCGGAGAACC TCTCGAAGCT GAAGACGTGC GGCGTGTCGG TGCTCGACGC GCCGGACCAG
ATGTTCGCGG CGACGCTGCA CTACATCGGC AAGGATCCGA TGAGCACGAA CCCGGCCGAC
TACCAGGCCG CGATGCAGGT GCTCAAGAAG ATCCGCCCGT ACATCACGCA GTTCAACTCG
TCGGGCTACA TCAACGACAT GGTCGGCGGC GACATCTGCT TCGCGTTCGG CTGGTCGGGC
GACGTCGTGA TCGCGAAGCA CCGCGCGCTC GAGGCGAAGA AGCCGTACAA GCTCGAGTAC
TACGTGCCGA AGGGCGGCGC GCCCGTATGG TTCGACGTGA TGGCGATCCC GAAGGACGCG
AAGAACAAGG ACGCCGCGCT TCAATGGATC AACTACATCG AGGATCCGAA GGTTCACGCG
TCGATCACGA ACGCGGTCTA CTACCCGAGC GCGAACGCGC AAGCGCGCAA GTACGTGCGC
CCGGATGTCG CGAACGACCC GGCCGTGTAC CCGCCTCCGG ACGTCGTGAA GACGCTGTTC
CTGCTCAAGC CGCTGCCGCC CGAGATCCAG CGCCTGCAGA CGCGTCTTTG GACCGAGCTG
AAATCGGGAC GCTGA
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| Protein sequence | MHGRAAGAAF GRAGARPPTR NDERAPPEFR VGDPFGPRGL FSGWTRADNP IKLRPPAASR
RPAPCNRKVR MCSVCATTAG NFCGGDGLVV AFGVFKGRRE TTRRSGEADG DRIGSIRENG
MKAKVAGRLT ALALCAGATV AAAKDTQLNV YNWSDYIAKD TIPNFEKQTG VKVRYDNYDS
DDTLQAKLLT GNSGYDIVVP TGNYAGKQIQ AGIFTPLDKS KLPNLKYLDA QLMALVAGAD
PGNKYVVPWA YGTTGLGYNV DKAQKVLGKV PLDNWDILFK PENLSKLKTC GVSVLDAPDQ
MFAATLHYIG KDPMSTNPAD YQAAMQVLKK IRPYITQFNS SGYINDMVGG DICFAFGWSG
DVVIAKHRAL EAKKPYKLEY YVPKGGAPVW FDVMAIPKDA KNKDAALQWI NYIEDPKVHA
SITNAVYYPS ANAQARKYVR PDVANDPAVY PPPDVVKTLF LLKPLPPEIQ RLQTRLWTEL
KSGR
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