Gene BMA10247_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1049 
Symbol 
ID4893542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp1042366 
End bp1043265 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content74% 
IMG OID640149708 
Productputative pilus assembly protein CpaB 
Protein accessionYP_001080604 
Protein GI126449256 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.342434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATC ATCTGACCAA GATCATCGCG GGGCTGCTGA TCGGGATCGC GATCCTGCTC 
GGCATTTACG CATGGCTGCT CGGGCGCAAG CCGGCGCCTG TCGCGCCGGG CGCCGCGCCC
GCCGTGGCGA CGGCGATGGT GCCCGTCGTC GTCGCGGCGC GTGCGCTGCC CGCGGGGCAG
CCGATTCCCG CCGATGCGCT GAAGGTGCAG CAGACGCCGA CGCCGATCGC CGGCGCCTTC
CCGAATCCGA TGCTCGTGAC GGGCCGCATC CCGGCGAGCG ACATCGGCGC GCAGGCGCCG
GTGCTCGAGA GCGAGCTGAT GTCGGGCCTC GCCGACCAGA TCGCGCCCGG CGAGCGTGCC
GTCGCGATCA AGGTCGACGA TACGAACGCG GTCGGCAACC GGCTGCGTCC CGGCAATTTC
GTCGACGTGT TCGTGAACCT GAAGCGCGAA GGCGGCTTCG GTGCGACCGG CTCCGAGATC
GCGCAGACCC AGGCGCGGCT GCTGCTGTCG CGGGTGCGCG TGCTGTCGTT CGGCGATGCG
ACGGTGGAGC GCGACGGCAC GCCGGGCCCG ACGGGCGCGG GCGCGCGCAC CGCGGTGCTC
GCCGTGCCGA CCGCGCAGGT CGACGCGCTC ACGCTCGCCG AGGCGAGCGG GCGGCTCGTG
TTCGCGCTGC GCAGCCCGCG CGACGAAGAC ATCGCCGCGC AGACGGTGGC GATCCGCGCG
CCGGCCGGCG CCGGGCCGTC GAATCAGGCG GCGACGGGGC TCGTGCTGAG CGAACTGTCG
GGCAGCGGGG CGCCCGCGCA GGCGCCGCGC GCGGCTCCGA CGCGAGTGAC GGCCGCGCCG
CATGCGGCGG GCAGCATCGA AGTGATCCGG GGAGGGCGAG CCGAGACGCT CGCCTATTGA
 
Protein sequence
MANHLTKIIA GLLIGIAILL GIYAWLLGRK PAPVAPGAAP AVATAMVPVV VAARALPAGQ 
PIPADALKVQ QTPTPIAGAF PNPMLVTGRI PASDIGAQAP VLESELMSGL ADQIAPGERA
VAIKVDDTNA VGNRLRPGNF VDVFVNLKRE GGFGATGSEI AQTQARLLLS RVRVLSFGDA
TVERDGTPGP TGAGARTAVL AVPTAQVDAL TLAEASGRLV FALRSPRDED IAAQTVAIRA
PAGAGPSNQA ATGLVLSELS GSGAPAQAPR AAPTRVTAAP HAAGSIEVIR GGRAETLAY