Gene BMA10247_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1038 
Symbol 
ID4892148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand+ 
Start bp1030195 
End bp1030839 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID640149697 
Producthfq protein 
Protein accessionYP_001080593 
Protein GI126449885 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00601589 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATC CTGCAGAATC CCATCCGCAA AACGACTTCA TCAATGCCGC GCGCAAGGAA 
CGCAAGCGCG TCGAAATTTA TCTCGTCAAC GGTATTCGAC TGACGGGTTG CATCGAGTCG 
TTCGACCAGT ATCTGGTGAT GCTGCGCACG CCCGTCGGCC TGCAAGGCAT CTATAAACGC 
GCCATCTCGA CGATCCAGCT CGACACGGGC GGCTCCCGTC CGGGCGGACG CGGCCCGCGC 
GCGGGCGGCG CCCACGGCGG CGGCGGACGC CCCGGCGGAC GCGAAGGCGG CGGTCATGGC 
CCGTACGGCT CGCACGGCGG CTCGCGCGAA CCCCGCGGCG ACGGCGGCGG CTATGGCGCT 
CGCGAATCGC GCGGCGACGG CGGTTATGGC TCCCGCGAAT CGCGCGGCGA CGGCGGCTAC 
GGTTCCCGCG AACCGCGTGG CGACGGCGGC TACGGTTCCC GCGAACCGCG TGGCGACGGC 
GGCTATGGCG CGCGCGAGCC GCGTGAACCG CGCGAGCCCC GCGAGTCTTA CGGCGCGCCG 
CAAGAAGGCG CATCGACGCC GTCCGGCACG CAGGAACGCA ACGGCAACGG CCCGGTGATC 
GTCACGCGCC GTCGCCGTTC GCTCGGCCCG ACCGACGGCC AATAA
 
Protein sequence
MANPAESHPQ NDFINAARKE RKRVEIYLVN GIRLTGCIES FDQYLVMLRT PVGLQGIYKR 
AISTIQLDTG GSRPGGRGPR AGGAHGGGGR PGGREGGGHG PYGSHGGSRE PRGDGGGYGA 
RESRGDGGYG SRESRGDGGY GSREPRGDGG YGSREPRGDG GYGAREPREP REPRESYGAP 
QEGASTPSGT QERNGNGPVI VTRRRRSLGP TDGQ