Gene BMA10247_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_1018 
Symbol 
ID4894938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp1007792 
End bp1008691 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID640149677 
ProductN-acetylmuramoyl-L-alanine amidase domain-containing protein 
Protein accessionYP_001080575 
Protein GI126450753 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0500286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC CCCTGCGCCA TACGCTTCTC GCGAGCTTCA GCATGCTCGC CGCCGCCTGT 
ACGACGCCCA CGCTCGTCAA TCGCGGCGAT TACTACGCCG ACACGAGCCT TCCCGCGCGC
AGCGTCGATT CGCGCATCCG CTTCCTCGTC ATGCACTACA CCGAGATCGG CGAAGCGCCG
TCGCTGCGCG TGTTGACGCA GGAGAACGTC AGCGCCCATT ACGTCGTGCC CGACGCGCCG
CGCACCGAGC GGGGCGCGCC CGTCGTCTAT CAGCTCGTGC CGGAAAGCGA GCGCGCATGG
CACGCGGGCG TGAGCGCGTG GCAGGGCGCG ACCGAGCTGA ACGGCGTGTC GATCGGCATC
GAGAACGTCA ACCGCGGCCC GATCGATACG CCGCACGGCC GCATGTGGGC GCCGTATCCG
CCCGCGCAGG TCGACGCGAT CGTTCGGCTG GCGAAGGATA TCGTCGCCCG CTATCGGATT
CCGCCGACGC GCGTCGTCGG CCACAGCGAC ATCGCGCCGC AGCGCAAGAT CGATCCGGGC
CCGCTGTTTC CGTGGCGCGC GCTCGCGAAG GCGGGCGTCG GCGCGTGGCC GGACGACGAG
ACGGTGGCCG CGCGCCTCGC GGGCCGCCCG CCGAAGTCGC TCGTCGACGT GCGCGAGCTG
CAGCTGAAGC TCGCGCGCTA CGGTTACGAC GTCGCGACGG ACGGCGTGCT CGACGACCGC
ACGCGGCGCG TGTTCTCCGC GTTCCAGATG CATTTCCGGC CGACCGATTA CGCGGGCAAC
CCGGATGCGG AGACCGACGC GATCGCGCAG GCGCTGCTCG ACAAGTACAT GCCGTCGCAG
CCGGCGCCCG AGCGCGATGC GGCGGCGCTC GACGCGGCGA GCGGCGTGGC CGCCCAATGA
 
Protein sequence
MKFPLRHTLL ASFSMLAAAC TTPTLVNRGD YYADTSLPAR SVDSRIRFLV MHYTEIGEAP 
SLRVLTQENV SAHYVVPDAP RTERGAPVVY QLVPESERAW HAGVSAWQGA TELNGVSIGI
ENVNRGPIDT PHGRMWAPYP PAQVDAIVRL AKDIVARYRI PPTRVVGHSD IAPQRKIDPG
PLFPWRALAK AGVGAWPDDE TVAARLAGRP PKSLVDVREL QLKLARYGYD VATDGVLDDR
TRRVFSAFQM HFRPTDYAGN PDAETDAIAQ ALLDKYMPSQ PAPERDAAAL DAASGVAAQ