Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0875 |
Symbol | pvdA |
ID | 4892485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 857314 |
End bp | 858720 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640149538 |
Product | l-ornithine 5-monooxygenase |
Protein accession | YP_001080438 |
Protein GI | 126449772 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3486] Lysine/ornithine N-monooxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.635923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGAG ATACCGTATT CGACCTGATC GGCGTCGGTT TCGGGCCGTC GAACCTCGCG CTCGCCGTGC GACTCGCGGA AGCGGGCGAG CGCGCCGCGT TCGCGCATTG CTACGTCGAG CGCCAGCCGG CGTTCGGCTG GCACCGCGGG ATGCTGCTCG ACGACTGCCG GATGCAGATT TCCTTCCTGA AGGATCTCGT CACGCTGCGC GACCCGAAGA GCCGCTTCAC GTTCATCAAC TACCTGTACG AGCACGGGCG CCTGAGCGAG TTCGTGAACC TGAAGAACTT CTATCCGACG CGCGTCGAGT TTCACGATTA CCTGAGCTGG GTCGCGAACG CGTTCGACGA GCGCGTCCAT TACGGCGAGA CGGTGACGGC GATCGAGCCC GTCGCGGCGC CGGGCGCGCC CGGCGAGATC GACGCGCTGC GCGTGTTCTC GAAGGGCGCC GACGGGCGCG AGCGGCAGCG CGTCGCGCGT GCGCTGTCGG TGGGCGTCGG CGGCGCGCCG AGCGTGCCGG ATGCGTTCGC CGCGCTCGGG CCCGAGTGCG TCGTCCATTC GTCGAGCTAC CTCACGTCGA TCGAGCGCCT GGTCGGCGCG CCGGGCGCGC ACGCGCGAAA GCGCATCGCG GTGATCGGCG CCGGGCAGAG CGCGGCCGAG GTGTTCGTCG ATCTCGCGCG GCGCTTCCCG CACGTCGAGG CGAGCCTCGT GATCCGCTCG GGCGCGCTCA AGCCCGCGGA CGACAGCCCG TTCGTCAACG AGATCTTCAA TCCGGCGTTC ACCGACGTCG TCTACGCGCA GCCGGCGAGC GGCCGGCGCT CGCTCATCGA GCGCTTTCGC GACACGAACT ACGCGGTCGT CGATCGCCCG CTCATCGAGC AGATCTACGA GATGCTCTAT CTGCAGCGCG TCGCCGGCGA GGCGCCCGGC GCGCCGCGCC ACCGGCTGCT CGCGAACACC GCGGTCGAAT CCGCCGCGCG CACGGCGCAC GGGCAGGTGG AGCTCGCGTT GCGCGACCGG CTGACGGGCG ACGCGCGCAC CGAGCGCTTC GACGGGCTCG TGCTCGCGAC GGGCTACCGC CGCGACACGC ATCTGCCGCT TCTCGAGGGG CTCGCGCCGC ACCTGGGCGA CGCGCTCGCG GCGGGCGACG TCGCGCGCGA CTACCGGCTC GCGACGCCCG CGCACTTCAA GCCGCGGATC TATCTGCAAG GCTGCTGCGA GGACAGCCAC GGGCTGTCCG ACACGCTGCT GTCGGTGCTC GCGCGGCGCG CGGACGAAAT CGCCGCGTCG CTCGCCGACG CAGCCGACAC GACCGAATAC GAAGAAGCCG ACCCGGCCGC CGGCCGCGCG CGGCCGCGAC ACGAAAACAA CGGGGTGAGC GACGGCCGGC TGGCCATCGC TCTTTGA
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Protein sequence | MQRDTVFDLI GVGFGPSNLA LAVRLAEAGE RAAFAHCYVE RQPAFGWHRG MLLDDCRMQI SFLKDLVTLR DPKSRFTFIN YLYEHGRLSE FVNLKNFYPT RVEFHDYLSW VANAFDERVH YGETVTAIEP VAAPGAPGEI DALRVFSKGA DGRERQRVAR ALSVGVGGAP SVPDAFAALG PECVVHSSSY LTSIERLVGA PGAHARKRIA VIGAGQSAAE VFVDLARRFP HVEASLVIRS GALKPADDSP FVNEIFNPAF TDVVYAQPAS GRRSLIERFR DTNYAVVDRP LIEQIYEMLY LQRVAGEAPG APRHRLLANT AVESAARTAH GQVELALRDR LTGDARTERF DGLVLATGYR RDTHLPLLEG LAPHLGDALA AGDVARDYRL ATPAHFKPRI YLQGCCEDSH GLSDTLLSVL ARRADEIAAS LADAADTTEY EEADPAAGRA RPRHENNGVS DGRLAIAL
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