| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0824 |
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| Symbol | cpaB |
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| ID | 4892537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 795702 |
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| End bp | 796754 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640149487 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001080387 |
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| Protein GI | 126449623 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.570609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCATT TTCTCAAGCT CGCCGGCCTG ATGCTCGTCG CGGTGGTCGG CGCGTTTCTG
TTCCGCGCGC TGTACGTCGC GGCGTCGCAG CCGCGCCCGG CCGCGCCGCC GCAGCAGGTG
CGCGTGCGTG TGGCGGCCGC CGATCTGCCG GCGGGCCTGC TGCTGCGCGA TGCCGATCTC
GGCTGGAAGA CGATGGCGCG CTCCGCCGCG CCCGCCGGCG CGTTGATCGA GGGCGATGCG
CGCGGCGACG GCAAAGCCGC CGGCGCGGCG AACGACGCGA GCGCCGCCGC GGCCGGCGAG
CCGAAGACGG ACCTCAAGGG CGACCTGCTG CGTCATCCGG TGCGCGCGGG CGCGCCGCTC
GGGCCGGCCG ACGTGATTTC GCCGAGCGCG CCGGGCTTTC TCGCGGCCGC GCTCAAGCCC
GGCATGCGGG CGATTTCGGT CGCGATCGAC GACGTGTCCG GCAACGCCGG CCTCATCGAG
CCGGGCGACT ACGTCGACGT GCTGCTCACG CAGCAGCTCG CCGCGCCGGG CGGCACGCCG
GCCGATCCGC AGCGCGCGGT CGAATCGGAG ACGATCGCCG CGCGGCTGCG CGTGCTCGCC
GTCGGCTCCG CATTCCAGCG GCCCAAGGAC GACGCCGCGC AGCCGAACAC CCGCGCGCGC
ACGGTGACGT TCGAGGTGAG CTCGCGCGAC GCGCAGGTGA TCACGGTCGG CGCGCATCTG
GGCGCGCTGT CGCTCGCGCT GCGCAGCTTT GCAACGAGCG ATCGCGGCGC CGTCGGCACG
GCGCCCGCGG AGCCGCCCGC GCCGCCCGTA TGGGCGGGCG ACGTGTCGCG CGCGCTGCGT
GCGCAGGCGC CGGCCGAGGC GCCCGCGCAG CCGCGCCGCG TGGGCGCCGC GCGCGCGCAG
GCCGAGCGTC GCGTGATCGT CTATCGCGGC TCGAAGCAGG ACGATGCGGC GAGCGCCGGT
ACGCCGCTGC CGGGCGGTGT GCCGCCGATT CCGACGCTGC CGCCGCTGCC GGGAGCGGCC
GCGCCGCCCG CCGGCGCGCG GCCCGCGGCG TGA
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| Protein sequence | MSHFLKLAGL MLVAVVGAFL FRALYVAASQ PRPAAPPQQV RVRVAAADLP AGLLLRDADL
GWKTMARSAA PAGALIEGDA RGDGKAAGAA NDASAAAAGE PKTDLKGDLL RHPVRAGAPL
GPADVISPSA PGFLAAALKP GMRAISVAID DVSGNAGLIE PGDYVDVLLT QQLAAPGGTP
ADPQRAVESE TIAARLRVLA VGSAFQRPKD DAAQPNTRAR TVTFEVSSRD AQVITVGAHL
GALSLALRSF ATSDRGAVGT APAEPPAPPV WAGDVSRALR AQAPAEAPAQ PRRVGAARAQ
AERRVIVYRG SKQDDAASAG TPLPGGVPPI PTLPPLPGAA APPAGARPAA
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