Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0596 |
Symbol | dinF |
ID | 4893334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 578983 |
End bp | 580374 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640149262 |
Product | DNA-damage-inducible protein |
Protein accession | YP_001080164 |
Protein GI | 126449686 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0179694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCT CCTCCCCTCC GACGCACGCA GACGAAGACC CCGAGCCGCG CGCTGCCGCG AACGGGCATC GGCGCGTGCT CGGCCTCGCG TTGCCCATCA TCGCGGCCAA TCTCACGCAG CCGATTCTCG GCGCGGTCGA CACCGCCGTC GCCGGTCACC TGAACGGCCC GCAATATCTC GGCGGCGTCG CACTCGGCGG CCTCTTCTTC AATTTCGTGT ACTGGGGCTT CGGCTTCCTG CGAATGGGGA CGACGGGGCT CGTCGCGCAA GCGTTCGGCG CGAACGACCT CGCCGGAATC CGCATCAACG TACTGCGCGC GCTCCTGCTC GCGTTCACGC TCGGCGCGGC GGTGCTCGCG CTGCAAACGC CGCTGCTCGG CATCGCGTTC GCCGCGCTCG GCGGCAGCGA TTCGGTTCGC TCGACTGCGC TCGAATACGC GCACGCGCGG ATCGGGGCCG CGCCGTTCGC GCTCGCGAAT TACGTCGTGC TCGGCTATCT GCTCGGCATG CAACGCGTGC GTCTCGCACT CGTGATCCAG GTGCTCGTGA ACGTCGTCAA CATCGGCGCG GTGCTGCTCT ACGTGTACCG CTTCGATTGG GGCGTCGCAG GCATCGGCGC CGCGACCGCG ACGGCCGACA TTGCCGGCTT CGCGGCGAGC GCGCTGCTGC TGCGCTGGCT GAACCCGCGC GGCCTCGCGA AGATCAGGCG CGTCGAGCTC TTCGATCGCG CGGCGCTCGC ACGTCTCGTC GCGCTCAATC GCGACATCTT CATCCGCACG CTGTGTCTGC TGTCGGCGTT CGGCTGGTTC GCGCATCTCG GTGCGCGACA AGGCGACGCG ACGCTCGCCG CCAACGCGCT GCTGCTCAAT TTCCAGACCT TCATGGCGTA CGCGCTCGAC GGCTTCGCGC ATGCGGCGGA AGCGCTTGTC GGCGCGGCGG CCGGCGCGCG CAATCGCGAT GCATTCCGCC AAGCGCTGCG CACGACGTTC TTCTGGGCGG GGATCGGCGC GCTCGCGTTC GCGCTCGCCT ATTGGTGCGC GGGCGGCTGG ATCGTCGCGC AACTCACCGA TCAGCCGTCC GTGCGGGGCG TCGCCGAACG TTATCTCCCG TGGGCCGCGC TCTCACCGGT GATTTCCGTC TGGGGTTTCA TGCTCGACGG CGTGTTCATC GGCGCGACGC ACACGCGCGC GCTGATGCGG GCCATGGCGA CATCGTTCGC GCTGTTCGTC GCCGCAACGC TCGCGCTGGT CGGCCCGCTC GGCAATCACG GGCTCTGGAT CGCATTGCTC GTGTTCATGG CCGCGCGCGG CGCGACGCTC GCGCGCCGTC TGCCGGGGCT CGAGCGAGCC GTCGCACCGG ATGCGGCGCG AGCGCCGAGC GCGGCCGGCT GA
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Protein sequence | MSASSPPTHA DEDPEPRAAA NGHRRVLGLA LPIIAANLTQ PILGAVDTAV AGHLNGPQYL GGVALGGLFF NFVYWGFGFL RMGTTGLVAQ AFGANDLAGI RINVLRALLL AFTLGAAVLA LQTPLLGIAF AALGGSDSVR STALEYAHAR IGAAPFALAN YVVLGYLLGM QRVRLALVIQ VLVNVVNIGA VLLYVYRFDW GVAGIGAATA TADIAGFAAS ALLLRWLNPR GLAKIRRVEL FDRAALARLV ALNRDIFIRT LCLLSAFGWF AHLGARQGDA TLAANALLLN FQTFMAYALD GFAHAAEALV GAAAGARNRD AFRQALRTTF FWAGIGALAF ALAYWCAGGW IVAQLTDQPS VRGVAERYLP WAALSPVISV WGFMLDGVFI GATHTRALMR AMATSFALFV AATLALVGPL GNHGLWIALL VFMAARGATL ARRLPGLERA VAPDAARAPS AAG
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