Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0472 |
Symbol | recB |
ID | 4892602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 460179 |
End bp | 463991 |
Gene Length | 3813 bp |
Protein Length | 1270 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640149139 |
Product | exodeoxyribonuclease V, beta subunit |
Protein accession | YP_001080042 |
Protein GI | 126449813 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.352906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCACG TCGCGCCATC CGGCCCGTCG GCGAGCGAGC TCGACGTGTT CGCGTGTCCG CTCGACGGTG TGAACCAGAT CGAGGCGTCC GCGGGCACCG GCAAGACCTG GAACATCTGC GCGCTGTACG TGCGCCTGCT GCTCGAAAAG GATCTCGGCG CGGACGAGAT TCTCGTCGTC ACGTTCACGA AGGCGGCGAC GGCCGAGCTG CACGAACGGA TTCGCGCGCG CCTCGCGCAG CTCGCGCACG CGCTCGACAC GGGCGACGAC GGCGGCGATC CGTTCATCGC GCGCCTGTTC GAGACGACGC TCGCGCCCGA GCGCGGGCTC GATCCGCAAA CGGCGGCGAA GCGCGTGCGT CGCGCGCTGC GCGCATTCGA CCAGGCGGCG ATCCACACGA TCCACGCGTT CTGCCAGCGG GCGCTGCAGG AAGCGCCGTT CGCGGCGGCG ATGCCGTTCG CGTTCGAGAT GGAAGCGGAC GACGGCGCGC TGCGCTTCGA GCTGGCCGCC GATTTCTGGC GCACGCGTGT CGAGCCCGTC GCGGCGGCCT ATCCGGCGTT CGCCGAGTGG CTCGTCGAGT ACGGCGCGGG GCCGGCGGCG CTCGACGCGC AGCTCGCGCG GCGGCTGAAG AAGCCGCTGG CGCGACTGCG CTGGGACGGC TTGCACGCGG CCGACGACGG CGCGGAAAGC GCCGCGCGCG CGCACTTCGA TACGGCGGCC GCGATCTGGC GCGACGAGCG CGGCGTGCTC GGCACGCTGC TCGCCGACGC GCAGCCGTCG TTGAACCAGC GCTCGCACAA GCCGGAGGCG GTGAGCGAGG CGCTCGACGC GTGGGCGCGT TATTTCGAGC AGGCGAGTGC GGTGGCCGCG TTGCCGCGCG CGGCGCTCAA GCTCACGCAG TCCGCGCTCG AGAAAGCGAC GAAAAAGGGC GGCGCGACGC CGCGCCACGC GTTCTTCGAC GTCGCGCAGG CGCTCGAGGC GGCTGTCGCC GCGCTCGAGG CCGCGCAGCG CGCGCGCTGG CTGTCGCTCG TCGAGCAATG GCTCGACGCG GCGCCCGCCG AGCTCGCGCA GCGCAAGCGC ACGCGCCGCG TCGTATCGTT CGACGATCTG CTCGCGAACC TGTATCGCGC GCTCGACGCG CATCCGTGGT TGCGCGAGAC GCTGCGCGCG CGCTATCCGG CCGCGCTCAT CGACGAATTC CAGGATACGG ACCCGCTGCA GTTCGCGATC TTCGATACGA TCTTCGCGCC CGCCGGCCCG CTCTTTCTCG TCGGCGATCC GAAGCAGGCG ATCTACAGCT TCCGCGCGGC GGACCTGCAC ACGTATCTCG CCGCGCGCGC GCGGGCGTCC GCGCGCTACA CGCTCGCGGT GAACCAGCGC TCGACGCCCG CGATCGTCGA TGCGTGCAAC CGCGTGTTCG GCGCGAACCC GCGCGCGTTC GTGCTCGACG GGCTCGATTA CGAACCGGTG CGCGCGGGCT CGCGCGTGCG CGCGCCGCTT GTCGACGCGA CCGATCCGCT TGCCGGCGCG GGCGACTTCC GCATATGGAC GCTGCCCGCC GGCGACGACG TGCTGACCAA GCGCGACGCG CAGCGGCACG CCGCGCATGC ATGCGCGGCG GAAATCGCGC GGCTGATGCG GGGCGCGCGC GAGCGCGCGG TGACGCTCGG CGGCGAGCCG CTCGCGGCGT CCGGCATCGC GGTGCTCGTG CAGACGCACC GGCAGGGCAG TCTCGTGAAG CGCGTGCTGG CCGCATGGGG AATCGGCAGC GTCGAGCTCG CCCAGGCGTC GGTATTCGCA ACGATCGATG CCGAGCAGCT CGAGCGCGTG CTGGCCGCCA TCGACGCGCC GGGCGACCTG CGGCGCCTGC GCTCGGCGCT CGCGTCCGAC TGGTTCGGGC TCGATGCGGC GGCGCTCTGG CGCCTCGAGC AGGGCGATGC CGAGCAGGAC GGCATCGACG CCGCCGCCCG CGGCGCGAGC GGCAACGGCG GCGGCGCGCG CGCCGCATCG GCGGGCGCGC CCGCGCCGTC GCCCGCGGAC GCCGATGCGA TGGGCTGGGT CGAGCGCTTC TCGCGCTACC GGCTGCTGTG GCGCGAGCGC GGCTTCGCGG TGATGTGGCG CACGCTCGCC GGCGAGCTGC GCATCGCCGA GCGGCTGATG GCGGGGGCGG ACGGCGAGCG GCGCGTGACC GACGTCAATC ACCTCGCCGA GCTGACGCAG GCGCGCGCGT CCGCGCAGCC GGGCATCGCG CCGACGCTGC GCTGGCTTGC CGCGCAGCGC CTCGAAGGCG GTGGGGACGA CGCGCAGTTG CGGCTCGAAT CCGACCGTAA CCTCGTGCAG ATCGTCACCG TTCACAAGTC GAAGGGGCTC GAATACGCGA TCGTGTTCTG TCCGTTCCTG AACGACGGCG GGCTGCGCGA GCCGGCCGGC TCCGGCCTGC CCGACGCGCG CGAGTACCAC GACGAATCGG GCTGCGCGGT GCTGCATTAC GGCTGCGACG ACGAAGCGGC CGAGCGCGCG TCGCGCGAGG CGGTGCGCGA GCAGGCGGCC GAGCGCGCGC GGCTCGTCTA CGTCGCGCTC ACGCGCGCCG TCTATCGGTG CTATCTGGTC GCGGGCACCT ATCAGTCGTC GCGTTCGACG AAGGAGGCGC GGCGCAGCGT GCTGAACTGG CTTGTCGCGG GCGCGGGCCG CGATTTCGAT GCGTGGCTGA AGGAGCCGCC CGAAGACGCG GAGCTCGCCG AGCGCTGGCA GGCGCTCGCG GGCGGCCCGG TGACGCTCGG CGCGCTGCCG GTGCCCGCGC ATCGCGAGCC GCTCGCGGCC GGGCACGATG CGCAGGCGAC GCGAGCCGCG CGACGTGCGA CGCGTGGCTT GCGCGACGCA TGGCGGATCG CGAGCTTCAG CTCGCTCGCA TCGGCGATCG CGCGCGATGA GAGCGGCATC GCGCGCGCGG CCGACGACGA GATGCGCCCC GATCATGACG CGCTTGCCGC CGCGCTCGGC GCGGACGCGC TCGAGCCGCC GGACGCGGCC GCCGCGATCG CGCCGGCGCC CGCCGCCGCG CCGCGCGAGC TCGCCGAAGA CGACATCCTC GCGTTCCCGC GCGGCGCGGC GGCGGGCGAA TGCCTGCACC GGCTGCTCGA GCTGAGCAAT TTCGCCGATG CGTCGACGTG GCCGCCCGCC GCGCTGCGCG CGCTGCACGA GCGCCCGGTC GAGGCGGAGC TCGCGCTGGC CGAGCGGCTG CCCGCGATGA TGACGCGGCT CGTCGCCGAT CTCGCGGCGA CGGAGCTCGT GCCGGGCATG CGCCTCGCGG CACTCGATCC GGCGCGGCGG CTCACGGAAA TGGAGTTCCT GTTTCCCGCG CCCGCGCTCG ATTTCAACGC ATTGCGGCGC TTGCTCGCCG CGCACGGCTA TCCGGACGTC GCGCTCGAAG CGGGCACGCT GGCCGGATTC GTCAAAGGAT TCATCGACAT GATCGTCGAG CACGACGGCC GCTTCTGGAT CGTCGACTGG AAATCGAATC ATCTCGGCAC GACGCCCGAA GCATACGGCG AGCGGGCGCT CGACGCCGCG ATGGCGCATC ACGCGTATCA CCTGCAGGCG CTGCTCTATA TGGTCGCGCT GCATCGCTAT CTGCGCGTGC GCATGCGTGG CTACGACTAC GACGCGCACA TCGCGGGCTA TCTGTACGTG TTCGTGCGCG GCGTGCGTCC CGATTGGCGA AATGGCGGCG CGAGCGCCGG CGTGCATGCG CGGCGGCCCG CACGCGCGCT GATCGAGGCG CTCGACGCGC TGATGCGCGA GGGGGATGCA TGA
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Protein sequence | MSHVAPSGPS ASELDVFACP LDGVNQIEAS AGTGKTWNIC ALYVRLLLEK DLGADEILVV TFTKAATAEL HERIRARLAQ LAHALDTGDD GGDPFIARLF ETTLAPERGL DPQTAAKRVR RALRAFDQAA IHTIHAFCQR ALQEAPFAAA MPFAFEMEAD DGALRFELAA DFWRTRVEPV AAAYPAFAEW LVEYGAGPAA LDAQLARRLK KPLARLRWDG LHAADDGAES AARAHFDTAA AIWRDERGVL GTLLADAQPS LNQRSHKPEA VSEALDAWAR YFEQASAVAA LPRAALKLTQ SALEKATKKG GATPRHAFFD VAQALEAAVA ALEAAQRARW LSLVEQWLDA APAELAQRKR TRRVVSFDDL LANLYRALDA HPWLRETLRA RYPAALIDEF QDTDPLQFAI FDTIFAPAGP LFLVGDPKQA IYSFRAADLH TYLAARARAS ARYTLAVNQR STPAIVDACN RVFGANPRAF VLDGLDYEPV RAGSRVRAPL VDATDPLAGA GDFRIWTLPA GDDVLTKRDA QRHAAHACAA EIARLMRGAR ERAVTLGGEP LAASGIAVLV QTHRQGSLVK RVLAAWGIGS VELAQASVFA TIDAEQLERV LAAIDAPGDL RRLRSALASD WFGLDAAALW RLEQGDAEQD GIDAAARGAS GNGGGARAAS AGAPAPSPAD ADAMGWVERF SRYRLLWRER GFAVMWRTLA GELRIAERLM AGADGERRVT DVNHLAELTQ ARASAQPGIA PTLRWLAAQR LEGGGDDAQL RLESDRNLVQ IVTVHKSKGL EYAIVFCPFL NDGGLREPAG SGLPDAREYH DESGCAVLHY GCDDEAAERA SREAVREQAA ERARLVYVAL TRAVYRCYLV AGTYQSSRST KEARRSVLNW LVAGAGRDFD AWLKEPPEDA ELAERWQALA GGPVTLGALP VPAHREPLAA GHDAQATRAA RRATRGLRDA WRIASFSSLA SAIARDESGI ARAADDEMRP DHDALAAALG ADALEPPDAA AAIAPAPAAA PRELAEDDIL AFPRGAAAGE CLHRLLELSN FADASTWPPA ALRALHERPV EAELALAERL PAMMTRLVAD LAATELVPGM RLAALDPARR LTEMEFLFPA PALDFNALRR LLAAHGYPDV ALEAGTLAGF VKGFIDMIVE HDGRFWIVDW KSNHLGTTPE AYGERALDAA MAHHAYHLQA LLYMVALHRY LRVRMRGYDY DAHIAGYLYV FVRGVRPDWR NGGASAGVHA RRPARALIEA LDALMREGDA
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