| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0406 |
|---|
| Symbol | |
|---|
| ID | 4894509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 395167 |
|---|
| End bp | 396444 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640149074 |
|---|
| Product | putative amino acid-binding protein |
|---|
| Protein accession | YP_001079981 |
|---|
| Protein GI | 126451428 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCT ATTGGATGCG TTTTGCCGCC GCGGCGTCGG CGGCGCTGAC CCTGGCGCTG
CCGATGCCCT TCGCGGCGGC TGCCGCGACG GGCGAGCCGA TCCGGATCGC GCTCGTCGAA
GGGATGTCGG GGCCGTTCGC GAATGCGGGC GCGGCCGTCG AGCGCAATCT GCGTTTCGGC
ATCGAGCGCG TCAATGCGCA AGGCGGCGTG CGGTTGCGCG ACGGCGCCCA TCCGCTCGAG
CTCGTCGTGC TCGACAGCAA GGGCAGTGTG GAGGAGGCGC TCGTCCAGTT GCGCGCGGCG
ACCGACAAGG GTATCGGCTT CGTCGCGCAG GGCAACGGCT CGGCCGTCGC GGCGGCGCTC
GTCGCCGCGC TCGACAGGCA CAACGCGCGC GACCCCGAGC ACCGCGCGCT GTTCCTCAAT
TATTCGGCCG ACGATCCCGC GCTGACGGGC CGCGACTGCA GTTTCTGGCA CTTTCGCTTC
GACGCGCACG CCGGCATGCG GATGGACGCG CTCGCCGACG TGCTCGCGCG CGACCGCGCG
GTGAAGAAAG TCTATCTGCT CAATCAGGAC TACAGCTTCG GGCACGACGT GAGCGCGCTC
GCGCGCGCCG CGCTGAAGGC GCGCCGGCCG GACATCGCGA TCGTCGGAGA CGAGTTCCAC
CCGATCGGGC GCGTGAAGGA CTTTTCGCCG TACGCCGCGA AGATCCGCGC GAGCGGCGCG
GATGCCGTCG TGACGGGCAA CTGGGGCAAT GATCTGACGC TGCTCGTGCG GGCAACGCGC
GAGCAAGGGC TCGCAGCCAA GTTCTATACG TTCTACGGCA ACAGCCTGGA CGCGCCCGCC
GCGCTCGGCG ACGCGGGCGT GAAGCGGGTG CTCGCGGTCG CCGACTGGCA CCCGAACGCG
GGTGGCGCGC GGTCCGATGC GTTCTACCGG GCGTTTCGCG CGCGCTTTCC GGCGGCGCAG
GACGATTACC CGGTGCGGCG GATGAGCGAG ATGATCGAGA TGCTCGCGGC GGCGATGACG
CGCGCGGGCT CGGCCGATCC GGTCGCGGTC GCGAAGGCGC TGGAGGGGAT GCGATACGAC
GACGGGTTTC ATCCGGCGCA GATGCGTGCG GCGGATCATC AGTTGATTCA ACCCCTTTAC
GTGATCGAGA TGGAGCGGGC CGGCGCGCCG GGCGTGCGTT TCGACAATGC GGGGTCGGGC
TACGGCTTCG CCACGGTGCT CGAGGCGCCG CCCACGCAGG GCGCGGCGCC CGCCGAGTGC
CGTATGAAAC GGCCGTGA
|
|---|
| Protein sequence | MSSYWMRFAA AASAALTLAL PMPFAAAAAT GEPIRIALVE GMSGPFANAG AAVERNLRFG
IERVNAQGGV RLRDGAHPLE LVVLDSKGSV EEALVQLRAA TDKGIGFVAQ GNGSAVAAAL
VAALDRHNAR DPEHRALFLN YSADDPALTG RDCSFWHFRF DAHAGMRMDA LADVLARDRA
VKKVYLLNQD YSFGHDVSAL ARAALKARRP DIAIVGDEFH PIGRVKDFSP YAAKIRASGA
DAVVTGNWGN DLTLLVRATR EQGLAAKFYT FYGNSLDAPA ALGDAGVKRV LAVADWHPNA
GGARSDAFYR AFRARFPAAQ DDYPVRRMSE MIEMLAAAMT RAGSADPVAV AKALEGMRYD
DGFHPAQMRA ADHQLIQPLY VIEMERAGAP GVRFDNAGSG YGFATVLEAP PTQGAAPAEC
RMKRP
|
|---|
| |