| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0292 |
|---|
| Symbol | |
|---|
| ID | 4894529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | + |
|---|
| Start bp | 279772 |
|---|
| End bp | 280701 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640148960 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001079867 |
|---|
| Protein GI | 126449327 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.431564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC TCATCAAGCG CGCGTCCGCC GAAGCGCGTG CGTTCCGGCG CGCGAAGCCG
TCTCCGTTCA ACGGCTCGGA GAAGCTCAAG CCGCCGCGCG CGAAGCGCGC CCGCGCCCAG
TTCGACGACG ACTTCGACCT GGGCGGCGTC GCCGTCCTCG ACGAGCCGCG CAAGCCGCGC
TTCGCGCCCG TCACGTTCTC CGAAGAGCGC GGTGTGCGCT ATCTGCATTT CGGCACCGAG
TGGGTGCAGG GCGCGATGCG CCTGTCGAAG CCGTATCACA TCGAGCTCGA GTACGCGCAG
CAGATGATGG CATGGCTGCT CTTTCTCGAA ACGCCGAAGC GCGTCGTCCA GCTCGGGCTC
GGCACGGGCG CGCTGACGAA ATTCGCGCAC CGCTTCCTGC CGCGCGCGCA TGTCGAGGCG
GTGGAGCTGA ATCCGGCCGT GATCGTCGCC GCGCGCTCGA TGTTCGAGCT GCCGCCCGAC
GACGCGCGCC TGAGCATCCA CGAAGCGGAC GCGTGGGATT TCGTCAATGA TCCGAAGAAT
CGCGGCGCGA TCGGCGCGCT GCAGATCGAC CTGTACGACG CGACCGCGCG CGGCCCGGTG
CTCGACAGCG TCGCGTTCTA TCGCGCGGTG CGCGCTTGCC TCGCCGACGC GGGCATCGCG
ACGATCAACC TGTTCGGCGA CCATCCGAGC TTCGTGCGCA ACATGAAGCA TCTGAACGCG
GCGTTCGACC AGCGCGTGAT CGCGCTGCCC GAGGTACACG ACGGCAACCG GATCGCACTC
GCGTTCTCCG GTCCGCCGCT GTCGATCTCG TTCGCCCAGT TGACCGAACG CGCGAAGCTG
ATCGAAGCTA AGCTGAGTCT GCCCGCGCGT TCGTGGGTGA AAGGTTTGAA AGCGTCGTTC
GGCGAGCGCG CCGGCGTCTT CACGATCTGA
|
|---|
| Protein sequence | MTRLIKRASA EARAFRRAKP SPFNGSEKLK PPRAKRARAQ FDDDFDLGGV AVLDEPRKPR
FAPVTFSEER GVRYLHFGTE WVQGAMRLSK PYHIELEYAQ QMMAWLLFLE TPKRVVQLGL
GTGALTKFAH RFLPRAHVEA VELNPAVIVA ARSMFELPPD DARLSIHEAD AWDFVNDPKN
RGAIGALQID LYDATARGPV LDSVAFYRAV RACLADAGIA TINLFGDHPS FVRNMKHLNA
AFDQRVIALP EVHDGNRIAL AFSGPPLSIS FAQLTERAKL IEAKLSLPAR SWVKGLKASF
GERAGVFTI
|
|---|
| |