Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0273 |
Symbol | |
ID | 4893394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 262166 |
End bp | 262888 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640148941 |
Product | RNA pseudouridine synthase family protein |
Protein accession | YP_001079848 |
Protein GI | 126450171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0216712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG AAAGCATTCT GTTCACCCAA GGCTTCGGTT CGCGCCGCCA GTGCCGCGCG CTCGTCGAAG CGGGACACGT CGCCGTCGGC GGCGCGACGT GCGCCGACGC GCACGCATCG TTCGACACCA CGCAGCTCGT GTTCGAAGTC GACGGCGTCG CCTGGCCGTA CCGCGCGCGC GCTTACGTCG CGCTCAACAA GCCGGCCGGC TACGAATGCT CGCGCGAGCC GCAGCATCAT TCGAGCGTGT TCGCGCTGCT GCCGCCGCAG TTCGCCGAGC GTGGCGTCCA GTGCGTCGGC CGCCTCGACC AGGACACGAC GGGCCTGCTG CTCCTGTCCG ACGACGGCCA GTTCGTCCAC GCGTACACGT CGCCGAAACG CAAGGTGCCG AAAACCTATG TCGCGACGGT GCGCCACCCG CTCGACGACG CGCAGCTCGA CGCGCTGCGC GCGGGCGTGC TGCTGCACGG CGAGCCGAAA CCGGTCGCCG CGCTCGCCGC CGTTGCCCGA GGAGAACGAC TCCTCGAAAT GACGATCGCC GAAGGAAAAT ACCACCAGGT GAAGCGCATG GTCGCCGCCG CGAGCAACCG CGTCGAGGCG TTGCACCGCT CGCGCATCGG CGGCTTCGCG CTGCCCGAGG ATCTCGCCGA AGGCGCGTGG CGCTGGCTCG ACGAACGCGA TCTCGCCGCC TTGCGCGACA CGGCGGAAAC CCTGTCAGGG TAA
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Protein sequence | MDLESILFTQ GFGSRRQCRA LVEAGHVAVG GATCADAHAS FDTTQLVFEV DGVAWPYRAR AYVALNKPAG YECSREPQHH SSVFALLPPQ FAERGVQCVG RLDQDTTGLL LLSDDGQFVH AYTSPKRKVP KTYVATVRHP LDDAQLDALR AGVLLHGEPK PVAALAAVAR GERLLEMTIA EGKYHQVKRM VAAASNRVEA LHRSRIGGFA LPEDLAEGAW RWLDERDLAA LRDTAETLSG
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