Gene BMA10247_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_0177 
Symbol 
ID4894100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp170252 
End bp172096 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content72% 
IMG OID640148845 
ProductTPR repeat-containing protein 
Protein accessionYP_001079753 
Protein GI126451387 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCG CTTTCGACCG CGCGTTCGCC GCGCACCGCG CAGGCCGGCT CGACGATGCC 
GAGCACGGCT ACCGGGCCGT GCTCGCCGCC AATCCCGCCG ATGCCGATGC GCTGCACCTG
TTCGGGGTGC TGCGCCACCA GCAGGGCCGG CACGAAGAAG CAGCCGACCT CGTCGGCCGC
GCGGTCGGGT TGCGCCCGAA CGACGCCGCG CTGCAACTGA ATCTCGGCAA CGCGCTCAAG
GCGCTCGGCC GGCTCGACGA TGCGATCGAG CGCTTTCGCA ACGCGCTCAC GCTCGCGCCG
GCGTTCCCGC TCGCGCATTA CAACCTCGGC AATGCGTACG CGGCGCAGGA GCGGCACGAC
GACGCGGTCG ACGCGTTCAA GCGTGCGCTC GCGCTCACGC CCGGCGACGC GTCGATCCAC
AACAACCTCG GCAACGCGCT CAACGCGCTC GGCCGGCACG ACGACGCGCT TGAGGCGTTT
CGCCGCGCGC TCGAGCTACG CCCCGGCCAC GCGGGCGCGC ACAACAATCT CGGGATGGCG
CTCGCCGCGC TTGGTGATAC CGACGCGGCG ATCGCGCACT TTCGCGCGGC GATCGCCGCG
GAGCCGCACT TCGTCGCCGC GCATTTCAAT CTCGGCAACG CGCTCGATGC GATCAGCCAA
CATGCGCAGG CGCAGCATGC GTTCGAAGCC GCGCTCGCGC TGCAGCCGCG CTTCGCGCTT
GCGCTGTTCG GGCTCGCGAA CACGCTCGCG GCGCGCGGCC GCCATCGCGA CGCGCTGCCG
CATTACGAAC GCGCGGTCGG GCTCGATCCG TCGTTCGTGC TCGCATGGCT TAATCTCGGC
ACCGCGCATC ATGCGCTCGG CGCGCACGAA ATGGCGCTGC GCGCGTTCGA TCAGGCGCTG
CGGCTCGATC CGTCGCTCAC GCTCGCGCAA ATGCATCGCG CGGTCACGCT GCTCACGCTG
CGCGATTTCG CGCGCGGCCT GCCCGCGTAC GAAGCACGGC ATGCGCTGCC GGGCGCGGCG
CCGCTCGGGC CGCTGCCGCG CTGGCAAGGC GAGCCGATCG CGAACCGCAC GCTGCTCGTG
CGCGCCGAGC AGGGCTTCGG CGACACGCTG CAGTTCGTGC GGCTCGTGCC GCTCGCGCGC
GCGCGCTGCG CTCGGCTGAT CCTGCAGGTC CAGCCCGCGC TGCTGCCGCT CATCGCGCCG
ATGGCCGCGC GCTGGCGCGT GAGCGTCGTG TCGGCCGACG CGGCGCGAAC GCCCGCCGCC
GATCTCGTCT GCCCGCTGTT GAGCCTGCCG TTCGCGCTCG GGCTCGAATA CGACGCGATT
CCGTCGCGCA CCCCGTATCT CGACGTGCCC GACGCCGCGC GCCGCCGCTT TCGCGGCTCG
CTCGGCGGGC AGGCCAAACG CAAGTTCGGC ATCGCCTGGT CCGGCAGCGC GCCGGTGCAG
GACAATCGCG CGCTACCGCT CGATGCGCTT GCCCCGCTCT TCGCGCTCGC CGGCATCGAC
TGGATCGTGC TGCAGCCGAC GCTGTCGGAT AGCGAGCGCG CGGCGCTCGA CGCGCATCCG
GATGCGGCTC GCATCCATCG GCTCGACGGC CTGACCGATT TCGCGGCAAC GGCCGCGCTC
GTCGATCGGC TCGACGGCGT CGTCGCGATC GACACCGCGG TCGCCCACCT CGCCGGCGCG
CTCGGCAAGC CGCTGTGGCT GATGCTGCCC GTCGCCGCCG ACTGGCGCTG GAGCACGGGC
GACGACAGTG CGTGGTATCC GCGCGCGCGG CTCGTCCGGC AATCGGAGCC GGGGCGGTGG
GACGACGTGG TCGCGACCGT TGCGGGCGAA ATCGCGCACG GATGA
 
Protein sequence
MESAFDRAFA AHRAGRLDDA EHGYRAVLAA NPADADALHL FGVLRHQQGR HEEAADLVGR 
AVGLRPNDAA LQLNLGNALK ALGRLDDAIE RFRNALTLAP AFPLAHYNLG NAYAAQERHD
DAVDAFKRAL ALTPGDASIH NNLGNALNAL GRHDDALEAF RRALELRPGH AGAHNNLGMA
LAALGDTDAA IAHFRAAIAA EPHFVAAHFN LGNALDAISQ HAQAQHAFEA ALALQPRFAL
ALFGLANTLA ARGRHRDALP HYERAVGLDP SFVLAWLNLG TAHHALGAHE MALRAFDQAL
RLDPSLTLAQ MHRAVTLLTL RDFARGLPAY EARHALPGAA PLGPLPRWQG EPIANRTLLV
RAEQGFGDTL QFVRLVPLAR ARCARLILQV QPALLPLIAP MAARWRVSVV SADAARTPAA
DLVCPLLSLP FALGLEYDAI PSRTPYLDVP DAARRRFRGS LGGQAKRKFG IAWSGSAPVQ
DNRALPLDAL APLFALAGID WIVLQPTLSD SERAALDAHP DAARIHRLDG LTDFAATAAL
VDRLDGVVAI DTAVAHLAGA LGKPLWLMLP VAADWRWSTG DDSAWYPRAR LVRQSEPGRW
DDVVATVAGE IAHG