| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0089 |
|---|
| Symbol | |
|---|
| ID | 4892908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 87221 |
|---|
| End bp | 88168 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640148758 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001079668 |
|---|
| Protein GI | 126451111 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.156043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGT CCTCCGAAAA ACTCGATCTC GCGACGCGCG CCGCCTGGCT CTACTACGTC
GCGGGCGACA CGCAGAACGA GATCGCCGAG AAGCTGCAGG TGTCGCGCCC CGTCGCGCAG
CGCCTCGTCG CGTTCGCGGT CGAGAAGAAC CTGATCCGCG TGCGCGTCGA CCACCGCATC
GCCGATTGCC TCGATCTGGC CGCGCAGTTG TCCAAGCGCT ACGGCCTCGC GATGTGCGAA
GTCGTGCCGA TCGACGGCGA CGCGCCCGAT GCGATCGACC GCAAGCTCGC CGTCGCGGGC
GCGCAGGTGA TGGAGCGCTA CCTGAACGAA GAAAGGCCGA TGGTGATCGC GGTCAGCAGC
GGCCGCACGC TGAAGGCCGC CGTCGCGCAG ATCGCGCAGC TCGAGCGGCC GCAGCACCGG
CTCGTGTCGA TGGTGGGCGC GATCGCGCAG GACGGCTCGT CGAACCCGTA CGACGTCGCG
CAGCACATCT CCGAGAAGAC GGGCGGCAAG CACTTCCTGC TGCCCGCGCC GCTGTTCGCG
GACAGCGAGG CCGAACGCGC GCAGTGGTGC AACCACCGGC TGTACCGGAT CGTCGAGAAG
CTGTCGGCGC AGGCCGACGT CGCGTTCGTC GGCGTCGGCA ACATCGGCGC GCACTGCCCG
CTGTTCGAGG ACGGCTTCAT CACCGCCGCC GAGCTCGGCG AGATGGTCGA GCTCGGCGCG
GTGGCCGAGA TGCTCGGCCT GCCGATCGAC GCGCAGGGGC GGCCGATCGT CGCGTCGACG
AGCACGCGCG TGACGAGCGT GGCGCTCGAT GCGCCGCCGT CGCGCCCGAC GATCGGCTTC
GCGGGCGGGC CGCGCAAGCG CGCCGCGGTG CTCGCCGCGC TGCGCGGCCG CTGGCTCTCG
GGGCTCGTGA CCGACGAGAC CTGCGCGCGC GCGGCGCTCG CCGAGTAG
|
|---|
| Protein sequence | MSKSSEKLDL ATRAAWLYYV AGDTQNEIAE KLQVSRPVAQ RLVAFAVEKN LIRVRVDHRI
ADCLDLAAQL SKRYGLAMCE VVPIDGDAPD AIDRKLAVAG AQVMERYLNE ERPMVIAVSS
GRTLKAAVAQ IAQLERPQHR LVSMVGAIAQ DGSSNPYDVA QHISEKTGGK HFLLPAPLFA
DSEAERAQWC NHRLYRIVEK LSAQADVAFV GVGNIGAHCP LFEDGFITAA ELGEMVELGA
VAEMLGLPID AQGRPIVAST STRVTSVALD APPSRPTIGF AGGPRKRAAV LAALRGRWLS
GLVTDETCAR AALAE
|
|---|
| |