Gene BMA10247_A2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A2079 
Symbol 
ID4890546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand
Start bp2013003 
End bp2014202 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID640148340 
Productputative outer membrane porin 
Protein accessionYP_001079251 
Protein GI126447461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG CGGCAGCAGC ATGGTTGGTG GCGGGGAGCA TGTGCGCCGG CGCGCACGCG 
CAAGGCACGG TGACGCTCTA CGGGATCGTC GACGCGGGGC TCGGCTATAC GAGCGACCAG
CGCGTCGCGC AGACCAAGGG GGCGCTCGGC TCGCCCGTCG GCTACCGCAA TGAGTCGAGC
TACGGCTTCG CGAGCGGCAC CTGGTCGGGC AGCCGCTGGG GGCTGAAGGG CAAGGAGGAG
CTGGGCGGCG GTCTCGCAGC CGTGTTCCAG CTCGAGAACG GCTTTAACAT CGGCACCGGA
CAGGCGGGGC AGGGCGGGCG AATGTTCGGC CGGCAGGCGT GGATGGGGCT GTCGAGCGAA
CGCTACGGGA CGCTCACGAT GGGGCGCCAG TACGATCCGA TCGTCGACTT CGTCGGCACG
ATCGGCGCGG GCGCGTTCCT GACCGGCATG GGCGCGCATC CGGGCGATCT CGACAACATC
GACAATCAGG CGCGCGAGAA CAACTCGATC AAGTACGTGA GCCCGAAGTT CGGCGGCCTC
GCGCTCGGCG CTCTGTACGG CTTCGGCAAT CAGGCGGGCA GCGTGAAGAA CCAGAACACG
TGGAGCGTGG GCGGCCAGTA TGTGAACGGG CCGTTCTCGC TCGGCGCCGC GTACCTGTAT
GCGACGAACG CATACGGCGC GAACGGCGGC GCGTGGACGG GTTCGTACGA CGGCACGTTC
GCTTCGTCGA TCAACGAAGG CTTCGCATCG GCGAAGAGCA TGCAGATCGT CGCGGCGGCG
AGCACCTATC AGATCGGCGC GGTGACGCTC GGCCTGTCTT ACAGCAACAC GCGGTACAAA
TCCGGCGCGT TCTCGACGTT CAACGGCACC GCGACGTACA ACTCGATCGG CGGCACCGTA
TCGTGGCAGG CGACGCCCGA GCTGCGCGTC GCGGCGGGCT ATGATTTCAC GCGTGGCAGC
TCGATCGACG GTCAGTCCGC GCCGAAATAC CATCAGGTGA ACTTCGCGTC GTACTACTAC
CTGTCCAAGC GCACCGCGCT GTATGGCCTC GTCGGTTATC AGAAGGCGAG CGGCAAGACG
CTCGATGCGT ACGGCAACGT CGTCGCGGCG ACGGCGTCGG TCGGCGACGT CGGCAACGGC
ATTTCGTCGG CGGGCGATAC GCAGACGCTC GTGCGCATCG GCGTGCGTCA CACGTTCTGA
 
Protein sequence
MKKAAAAWLV AGSMCAGAHA QGTVTLYGIV DAGLGYTSDQ RVAQTKGALG SPVGYRNESS 
YGFASGTWSG SRWGLKGKEE LGGGLAAVFQ LENGFNIGTG QAGQGGRMFG RQAWMGLSSE
RYGTLTMGRQ YDPIVDFVGT IGAGAFLTGM GAHPGDLDNI DNQARENNSI KYVSPKFGGL
ALGALYGFGN QAGSVKNQNT WSVGGQYVNG PFSLGAAYLY ATNAYGANGG AWTGSYDGTF
ASSINEGFAS AKSMQIVAAA STYQIGAVTL GLSYSNTRYK SGAFSTFNGT ATYNSIGGTV
SWQATPELRV AAGYDFTRGS SIDGQSAPKY HQVNFASYYY LSKRTALYGL VGYQKASGKT
LDAYGNVVAA TASVGDVGNG ISSAGDTQTL VRIGVRHTF