Gene BMA10247_A1870 details

Gene Information

• Locus tag: BMA10247_A1870
• Symbol: proV
• ID: 4890243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10247
• Kingdom: Bacteria
• Replicon accession: NC_009079
• Strand: -
• Start bp: 1800359
• End bp: 1801528
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640148135
• Product: glycine betaine/L-proline ABC transporter, ATP-binding protein
• Protein accession: YP_001079052
• Protein GI: 126447578
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4175] ABC-type proline/glycine betaine transport system, ATPase component
• TIGRFAM ID: [TIGR01186] glycine betaine/L-proline transport ATP binding subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCCC CGAAGGTCGT AGTCGAAGGT CTGTGCAAGG TGTTTGGAAG CAATCCGCGG 
CAAGCGCTGG ACATGCTCGC CGCAGGCGCG ACGAAGGATG AAGTGTTCGC GCGCACGGGC 
CAGGTGGTCG GCGTGCACAA CGTGTCGTTC GATGTGCGGG AAGGCGAGAT TTTCGTGCTG 
ATGGGGCTCT CCGGCTCCGG CAAGTCGACG CTGATCCGGC TCGTCAACCG GCTCGTCGAG 
CCGAGCGCCG GCAAGGTGAT GATCGACGGG CGCGACGTCG CCGCGGTGCG CCGCGCCGAG 
CTGACCGCGC TGCGCCGCAC CGACATGAGC ATGGTGTTCC AGTCGTTCGC GCTGATGCCG 
CAGCGCACGG TGCTGTCGAA CGCCGCGTTC GGCCTCGAAG TGGCCGGCAT GGGCCGCAAG 
GATCGCGAGC GGCGCGCGAT GGACGTGCTC GAGCAGGTGG GCCTCGCGCA GTTCGCGCAC 
AAGCTGCCCG CCGAACTCTC GGGCGGCATG CAGCAGCGCG TCGGCCTCGC GCGCGCGCTC 
GCGGTGAACC CGTCGCTGAT GATCATGGAC GAGGCGTTCT CCGCGCTCGA TCCGTTAAAG 
CGCAAGGAAA TGCAGAACGT GCTGCTGCAG CTTCAGAAAG AGCAGCGCCG CACGATCATG 
TTCGTGTCGC ACGATCTCGA GGAGGCGCTG CGCATCGGCA GCCGGATCGC GATCATGGAG 
GGCGGCCGGC TCGTGCAGGT CGGCACGCCG CAGGAAATCA TCGCGAACCC CGCCGACGAC 
TACGTGCGCG CGTTCTTCGA AGGCATCGAC ACGAGCCGCT ACCTGACTGC GGGCGACCTG 
ATGCTCACGG GCGCCGTGCC GACCCTGTCG AAGCTCGATG CGAAGCACGT CGCCGCTTCG 
CTGAACGGCA GCGCCGAATA CGCGTTCGTG CTCGACGAGG CGCGCAAGAT CCGCGGCTTC 
GTCACGCGCG ACGCGCTGAA CGGCGCGACG CCGAACGTGC GCCAGGTCGA AAGCATTCCG 
CGCGACGCAT CGCTCGATCA CGTCGTCGAG CGATGCGTCG CGCATCCGCA CGCGCTGCCC 
GTCGTCGACG ACGACGGCTG TTACTGCGGC TCGGTCGACC GGGCCGTGCT TCTGAAAGCC 
ATTACGCGTT CACGAGGTTC CCATGTCTGA 

 

Protein sequence

MDAPKVVVEG LCKVFGSNPR QALDMLAAGA TKDEVFARTG QVVGVHNVSF DVREGEIFVL 
MGLSGSGKST LIRLVNRLVE PSAGKVMIDG RDVAAVRRAE LTALRRTDMS MVFQSFALMP 
QRTVLSNAAF GLEVAGMGRK DRERRAMDVL EQVGLAQFAH KLPAELSGGM QQRVGLARAL 
AVNPSLMIMD EAFSALDPLK RKEMQNVLLQ LQKEQRRTIM FVSHDLEEAL RIGSRIAIME 
GGRLVQVGTP QEIIANPADD YVRAFFEGID TSRYLTAGDL MLTGAVPTLS KLDAKHVAAS 
LNGSAEYAFV LDEARKIRGF VTRDALNGAT PNVRQVESIP RDASLDHVVE RCVAHPHALP 
VVDDDGCYCG SVDRAVLLKA ITRSRGSHV