Gene BMA10247_A1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A1796 
Symbol 
ID4890936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand
Start bp1732700 
End bp1733839 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content71% 
IMG OID640148061 
Productputative outer membrane porin 
Protein accessionYP_001078979 
Protein GI126447075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0933184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATT CGGCCCGCCT GCTGGCCTGC GGCGCGCTCT GCGCCACCGC CGCGCATGCG 
CACGCGCAAT CGAGCGTCAC GCTATACGGC ATCGTCGACA CCGGCATCGA ATTCGTTTCG
CACGCGAGCG CGAAGGGCGG TTCCGCGTGG CGCATGCCGG CCGTCACGGG CGAGCTGCCG
TCGCGCTGGG GCTTGCGCGG CGTCGAGGAT TTCGGCGGCG GCTATCGCGC GCTCTTCGCG
CTCGAAAGCG GCTTCAACCT GCGCGGCGGC GAGCTCGGCC AGGGCGGGCG ACTGTTCGGG
CGTCAGGCAT ACGTGGGCCT GCGCGCGCCG TTCGGCACGC TCGCGTTCGG CCGGCAATAC
ATGATGACTT ATGTCGCGCT GCAGGGCGCG GACATCATCG GCCCCGACAT CTACGGGCTC
GGCTCGCTCG ACGCTTACAT CCCGAACGGC CGCGCGGACA ACGCGGTGAC CTATGTCGGC
AGCTATCGCG GCGTGACGCT CGGCGCCGGC TATTCGTTCG GCCGCGACTC GGCAGGCACC
GGCAATTCGC CGGGGCAGGG CACGTGCGTC GGCTCGGTGC CGGGGCGCGC GGTCGAATGC
CGGAGCGGGT CGGCGATGCT GAAGTACGAC GCCGAGCGCT TCGGCGTGGC CGCGTCGTAC
GAAGAGCAGC GCGGCGGCGC GAACGCGGCG GCGAACTTCT TCGACGGTGC CGCGCCGATG
CCGATCACAA GCAGTGCGGA CAAGGACACG CGCGCGCACG TGAGCGCGTA CGCGAACGCG
GGGCCGGTCA AGCTCGGCGC GGGCTGGATC GGCCGGCGCG TGTCGACCGA CGCACCCGCC
GCGCCCGACG TGCGCACCGA TCTGTTCTTC GTCGGCGCCG CCTATCGCGC GACGCCGTTC
GTGACGATCG ACGGCGAAGC CTACCGGATC GTCGATGCGC GGCACGACGC GCGCGCGACG
ATGGCGACGC TGCGCGCGAG CTTCTCGCTG TCGAAGCGCA CCGCCGTCTA TGCGCAGACC
GCGTACCTAT GGAACAGCGT GCACGCGCGC TATTCGGTGA GCGGCGGCGG AGGCGGCACG
ACGCCCGCGG CCGGCGTCGG CCAGCTCGGC GCGATGGTCG GCGTTCGGCA CATGTTCTGA
 
Protein sequence
MRHSARLLAC GALCATAAHA HAQSSVTLYG IVDTGIEFVS HASAKGGSAW RMPAVTGELP 
SRWGLRGVED FGGGYRALFA LESGFNLRGG ELGQGGRLFG RQAYVGLRAP FGTLAFGRQY
MMTYVALQGA DIIGPDIYGL GSLDAYIPNG RADNAVTYVG SYRGVTLGAG YSFGRDSAGT
GNSPGQGTCV GSVPGRAVEC RSGSAMLKYD AERFGVAASY EEQRGGANAA ANFFDGAAPM
PITSSADKDT RAHVSAYANA GPVKLGAGWI GRRVSTDAPA APDVRTDLFF VGAAYRATPF
VTIDGEAYRI VDARHDARAT MATLRASFSL SKRTAVYAQT AYLWNSVHAR YSVSGGGGGT
TPAAGVGQLG AMVGVRHMF