Gene BMA10247_A1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A1793 
Symbol 
ID4889226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand- 
Start bp1728612 
End bp1729625 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID640148058 
Productcarbohydrate ABC transporter periplasmic sugar-binding protein 
Protein accessionYP_001078976 
Protein GI126446171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.659256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTGGA TCAATCGCGG GCGAGCATTC GCCGGATGCG TCGCGCTGGC GGGTGCGCTC 
GCCGCCGCGC CGGCGGGCGC GGACACGGGC AAGGTCGGGC TCGACCTGCC TTTGCTGACC 
TCGCCGTTCT GGCAGTCGTA CAACCGCTAC CTGCTGCATT ACGCGAAGGA CATGCAGATC 
GATGCGCTCG CGCCCGTCAA TTCGAACGGC GATCCCGCGC AGCAGATCAC GGACATGAAC 
ACCCTGCTGA ATCTCGGCGC GAAGGGCATC GTCGTCGGCC CGCTCGATTC GGCGGCGATC 
GGCCGCGCGC TCGATGCGGC GGCCGCGCGC AACGTGCCCG TCGTCGCCGT CGACGTCGCG 
CCGACGCAGG GCAAGGTCGC GATGGTCGTG CGCGCCGACA ATCGCGCGTA CGGCGAGAAG 
GCGTGCCAGT ATCTCGGCGA GCACGTGCGC CGCGGCAAGG TCGTGCAGAT CATGGGCGAT 
CTCGCGTCGG TGAACGGCCG CGATCGCTCG GAGGCGTTCC GCGCATGCAT GAAGGGCTAT 
CCGAACCTGC AGGTGCTCGA GATTCCGGCC GCCTGGAAGG GCGACGTCGC CGCGACCGCG 
CTCGACAGCC TGCTGAGCGC GAATCCGGAC GTGAAGGGCA TCTACCTGCA GGCGGGCGGC 
GTCTATCTGT CGCCGACGCT GCAAACGCTG CGCCGCAAGC AGATGCTGTA TCCGGCGGGT 
GACGCGAAGC ACGTCGCGAT CGTCAGCAAC GACGGCATCC CGCAGGAATA CGAAGCGATC 
CGCCGCGGCG ACATCGACGC CACCGTGTCG CAACCGGCCG ATCTGTACGC GCGCTACGGG 
CTTTTCTACA TCAAGGCGGC GCTCGCCGGC CGAACCTTCA AGCCGGGGCC GACCGATCAC 
GGCAGCGTGA TCGTGCAGCG CGCGCCCGGC GTGCTCGAGG ATCAGTTGCC GGCACCGCTC 
GTGACGAAGG CGAACGTCGA CGACAAGGGC CTGTGGGGCA ACACGATCAA ATGA
 
Protein sequence
MTWINRGRAF AGCVALAGAL AAAPAGADTG KVGLDLPLLT SPFWQSYNRY LLHYAKDMQI 
DALAPVNSNG DPAQQITDMN TLLNLGAKGI VVGPLDSAAI GRALDAAAAR NVPVVAVDVA 
PTQGKVAMVV RADNRAYGEK ACQYLGEHVR RGKVVQIMGD LASVNGRDRS EAFRACMKGY 
PNLQVLEIPA AWKGDVAATA LDSLLSANPD VKGIYLQAGG VYLSPTLQTL RRKQMLYPAG 
DAKHVAIVSN DGIPQEYEAI RRGDIDATVS QPADLYARYG LFYIKAALAG RTFKPGPTDH 
GSVIVQRAPG VLEDQLPAPL VTKANVDDKG LWGNTIK