| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A1791 |
|---|
| Symbol | |
|---|
| ID | 4890402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 1726044 |
|---|
| End bp | 1727096 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640148056 |
|---|
| Product | carbohydrate ABC transporter permease |
|---|
| Protein accession | YP_001078974 |
|---|
| Protein GI | 126447860 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATCCAT CGAAGGAGTC GACGCCCATG AAGTCTAGCC TGACGAGTCC CGCGCTGCCG
CCGGGGCCGG CGCGCGTCGT CGCGCGCAAG CCGTTCGAGA TCGCGCGGCT GCGCGATCTC
GCGTTGCTGC CCGCGCTCGT GCTGCTGATC GCGATCGGCG CGTTCGTGAG CCCGAGCTTT
CTGACGAAGG CGAACCTGAT CAGCGTGCTC GGCGCGTCGG CCGCGCTCGC GCTCGTCGTG
CTCGCCGAAT CGCTGATCGT GCTGACGGGC AAGTTCGATC TGTCGCTCGA ATCGACGGTC
GGCATCGCGC CCGCGATCGG CGCGATGCTC GTGATGCCGG CATCGTCCGC CGGCTTCGGC
TGGCAGTGGC CCGCCGCCGC GGGGCTGGCC GCGATCGTCG CGATCGGCGC GCTGATCGGC
TTCGTCAACG GTTTTCTCGT CGTGCGGATG CGGCTGAACG CGTTCATCGT CACGCTCGCG
ATGCTGATCG TGCTGCGTGG GATGCTCGTC GGCGCGACGA AGGGCGGCAC GCTGTTCGAC
ATGCCGCCGG CGTTCTTCGC GCTCGCGACG ACGGGCGTGT TCGGCCTGCC GCTGTCGGTA
TGGCTCGCGG CGGCCGTGTT CGGCTGGGCG GCGTTCATGC TGCGCTATCA CCGCCTCGGC
CGCGCGCTGT ATGCGATCGG CGGCAACGAT CAGGCCGCGC GCGCGGCGGG GATTCGCGTC
GAACGGATCA CGTGGGGCGT GTTCGTGCTC GGCAGCACGC TCGCGTCGAT CGGCGGCCTC
GTCGTCACGG GCTACGTCGG CGCGATCAAC GCGAATCAGG GCAACGGGAT GATCTTCACG
GTGTTCGCGG CCGCGGTGAT CGGCGGCATC TCGCTCGACG GCGGCAAGGG AACGATGCTC
GGCGCGCTGA CGGGCGTGCT GCTGCTCGGC GTCGTGCAGA ACCTGCTCAC GCTCGCGCAG
GTGCCGTCGT TCTGGATTCA GGCGATCTAC GGCGTGATCA TTCTCGGCGC GCTGATGGTC
GCGCGCGTCG CGGGCGGCGA GGGGCCGGCA TGA
|
|---|
| Protein sequence | MHPSKESTPM KSSLTSPALP PGPARVVARK PFEIARLRDL ALLPALVLLI AIGAFVSPSF
LTKANLISVL GASAALALVV LAESLIVLTG KFDLSLESTV GIAPAIGAML VMPASSAGFG
WQWPAAAGLA AIVAIGALIG FVNGFLVVRM RLNAFIVTLA MLIVLRGMLV GATKGGTLFD
MPPAFFALAT TGVFGLPLSV WLAAAVFGWA AFMLRYHRLG RALYAIGGND QAARAAGIRV
ERITWGVFVL GSTLASIGGL VVTGYVGAIN ANQGNGMIFT VFAAAVIGGI SLDGGKGTML
GALTGVLLLG VVQNLLTLAQ VPSFWIQAIY GVIILGALMV ARVAGGEGPA
|
|---|
| |