Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A1768 |
Symbol | hlY-III |
ID | 4890642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 1703257 |
End bp | 1703877 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640148033 |
Product | hemolysin III |
Protein accession | YP_001078951 |
Protein GI | 126446384 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GCTGTCGGTG GCGGGGCTCG CCACGCTCGT GACGATGGGC GCGCTCGACG GCGACGCGTA CAAGGTGGTG AGCTTCAGCG TCTACGGCGC GATGCTGTGC GTGCTCTACG CGATCTCGAC GCTCTATCAC AGCGTGCGCG GCCCGCGCCT GAAAGCCATC CTGCAGAAAT GCGATCACGC GGCCATCTAT CTGCTGATCG CGGGCAGCTA TACGCCGTTT ACGCTCGTCA CGCTGCGCGG GCCGTGGGGA TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGCGTTCG GCATCGTGCA GGAGCTCACG CTCGGGCGGC GCACCCGCAT CGTATCGATG GCGCTGTACG TGCTGATGGG CTGGCTCGCG CTCGTCGCGA TCCGCCCGCT CGTCCATGCG CTGCCGGCGG CGGGAACGGC GTGGCTCGTC GCGGGCGGCG TCATCTATAG CGCCGGCATC TACTTTTTCG TCAACGATGA GCGCATCCGC CACGGGCATG GCATCTGGCA CCTGTTCGTG CTGGCGGGCA GCCTGTGCCA GTTCGTCAGC GTCGCCGGCT ACGTCGCGTG A
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Protein sequence | MHVGERFNSI SHLVGAVLSV AGLATLVTMG ALDGDAYKVV SFSVYGAMLC VLYAISTLYH SVRGPRLKAI LQKCDHAAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AAFGIVQELT LGRRTRIVSM ALYVLMGWLA LVAIRPLVHA LPAAGTAWLV AGGVIYSAGI YFFVNDERIR HGHGIWHLFV LAGSLCQFVS VAGYVA
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