Gene BMA10247_A1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A1766 
Symbol 
ID4890189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand
Start bp1700120 
End bp1702186 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content68% 
IMG OID640148031 
ProductEAL/GGDEF domain-containing protein 
Protein accessionYP_001078949 
Protein GI126447769 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.356944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCA CCTACAACCT TTGGCTGGTC GCGCTCTCGC TTGCGGTCGC CACGCTCGCC 
TCCTATACCG CGCTCGACCT GTCGGGCCGG ATCGCGCTGC TCGCGCACGG CCGGCTGCGC
CATGCGTGGC TCGCCGGCAG CGCGGTCGCG ATGGGCGTCG GCATCGGGTC GATGCACGTC
ATCGGCGTGC TGTCGGTGAC GCTACCCATC CGCATCGGCT TCGACGCCGC GATCACCGGC
CTGTCGCTCG CGCTCGCGAT CGTGGTGTCC GGCTTCGCGC TGTATACGAT CGCCGGCGCC
CAACTGACGA GGCTGCGGCT CGGCATCGGC GGCGTTCTGA TGGGGCTCGG CATCGCGGGC
ATGCATTACA CCGGCGACGC CGCGATGCGG ATGAAGCCCG CCATCGAGTA CGACCCGCTG
CTGTTCACGG CATCGATCGT CATCGCGCTC GTCGCCTCGA CGGTCGCGCT ATGGATCGCG
CAGACGCTCA TCGGCATCGG CCGATCGCGG CTGGCCCGCA TCGGCGCGGC CGGCGTGATG
GGCGCGGCGA TCACCGGCAT GCACTACACC GCCTACGCCG CCGCGATCTT CGCCCCCGGC
TCGACCTGCG GCGCGGCGAC CGGCATCGAT CTGCGCTGGC TCGCGGCGAC CGTCGCGCTC
TTCACGGTCG CGATCCTGAT CGTCGCGCTG ATCCTGTCGC ACTTCGACGT GCGCACGACG
CTGCTCGCCG GATCGGTTTC GCGCCTGAGC GGCCAGATCG TGCGCATGGC CGCATTCGAC
ACGCTCACGG ATCTGCCGAA CCGCCACACG CTGAACGAGC ACCTCGGCCG CGCGCTCGCG
GCGGCGCGGG CGCGCGGCGG CAAGCTGGCG ATCCTGTTCA TGGATCTCGA CGGATTCAAG
ACCATCAACG ATTCGCTCGG CCACCCGGCC GGCGACGAAG TGCTGAAAAC CTTCTCGCAG
CGGCTGCTGC GCTGCGTGCG AGACGGCGAC ATCGTCGCGC GCCTCGGCGG CGACGAATTC
GTCGTGCTGC TGGAGAGCGT TTCGTCGGAC GATGAAGCGG CCCGCGTCGC GCGCGATGTC
CTCGAACGGA TGCGCAAGGG GCGCTGGAAC GACGGGCAGG CGCTACAGGT CACGCCGAGC
ATCGGCATCG CGCTATATCC GAAGGACGGC GATACGGCCG ACACGCTGCT CAGGCACGCC
GATGCGGCGA TGTATGCGGC CAAGCGCGGC GGCCGCTGCA CCTACCGCTT CTTCGAGGCG
ACGATGGACG AGGCGGCGGC GCGGGCGCTC AAGCTTCAGC ACGCGCTGCA CGAAGCGCTC
GATTCCGACT ACTTCTCGCT GTGCTTCCAG CCGAAATTCC GCTGCGACGG CCACCGGCTC
GCGGGCGCGG AAGCGCTGTT GCGCCTGAAT CATCCGACGC TCGGCAAACT CGCGCCGATG
GAATTCATCC CCGTGGCCGA ACGCTCCGGC CAGATCATCG AGATCGGCTA CTGGGTGATC
CGCGAAACGT GCCGGCACCT CAGACGCTGG CGGTCCGCGC ACAGGGCGGC CTGCCGCATC
GCGATCAATC TGTCGCCTCG GCAGCTCGCG CAGCCGGATC TCGTCGCGAA CATCCTCGAG
ATCGTGCGCG CCGAGCACGT CGAGCCGCGC CAGTTGATGT TCGAGATCAC CGAATCGGTC
GCGATGGAAG ACCCGCCGCG CACGATCGAG ATGATCCGGC TGTTCCAGGC GCACGGCTTC
GAGATCGCGA TCGACGACTT CGGCACCGGC TATTCGAGCC TCGCCTATCT GCAGCGATTC
GGCGCGAAGC AGCTCAAGAT CGACCGATTC TTCACCCACG CGCTCGACGA GCAAGGCCAC
GAAGGCGGCG CGATCGTCTC CGCGATCATC GCGCTCGCCC ACTCGCTCGC GATGGACGTG
GTCGCCGAAG GCGTCGAGAC GCGCTCGCAG CTCGACCGGC TCAAGACGCT GATGTGCGAT
GAAATCCAAG GGTTCCTGCT CGGCCGCCCC GTGCCGCCGG AAGAGTTCGA GGCGATGGTG
CCGCTGCACT CCGAGGCGCC GGCATGA
 
Protein sequence
MHGTYNLWLV ALSLAVATLA SYTALDLSGR IALLAHGRLR HAWLAGSAVA MGVGIGSMHV 
IGVLSVTLPI RIGFDAAITG LSLALAIVVS GFALYTIAGA QLTRLRLGIG GVLMGLGIAG
MHYTGDAAMR MKPAIEYDPL LFTASIVIAL VASTVALWIA QTLIGIGRSR LARIGAAGVM
GAAITGMHYT AYAAAIFAPG STCGAATGID LRWLAATVAL FTVAILIVAL ILSHFDVRTT
LLAGSVSRLS GQIVRMAAFD TLTDLPNRHT LNEHLGRALA AARARGGKLA ILFMDLDGFK
TINDSLGHPA GDEVLKTFSQ RLLRCVRDGD IVARLGGDEF VVLLESVSSD DEAARVARDV
LERMRKGRWN DGQALQVTPS IGIALYPKDG DTADTLLRHA DAAMYAAKRG GRCTYRFFEA
TMDEAAARAL KLQHALHEAL DSDYFSLCFQ PKFRCDGHRL AGAEALLRLN HPTLGKLAPM
EFIPVAERSG QIIEIGYWVI RETCRHLRRW RSAHRAACRI AINLSPRQLA QPDLVANILE
IVRAEHVEPR QLMFEITESV AMEDPPRTIE MIRLFQAHGF EIAIDDFGTG YSSLAYLQRF
GAKQLKIDRF FTHALDEQGH EGGAIVSAII ALAHSLAMDV VAEGVETRSQ LDRLKTLMCD
EIQGFLLGRP VPPEEFEAMV PLHSEAPA