Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A1766 |
Symbol | |
ID | 4890189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 1700120 |
End bp | 1702186 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640148031 |
Product | EAL/GGDEF domain-containing protein |
Protein accession | YP_001078949 |
Protein GI | 126447769 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.356944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGGCA CCTACAACCT TTGGCTGGTC GCGCTCTCGC TTGCGGTCGC CACGCTCGCC TCCTATACCG CGCTCGACCT GTCGGGCCGG ATCGCGCTGC TCGCGCACGG CCGGCTGCGC CATGCGTGGC TCGCCGGCAG CGCGGTCGCG ATGGGCGTCG GCATCGGGTC GATGCACGTC ATCGGCGTGC TGTCGGTGAC GCTACCCATC CGCATCGGCT TCGACGCCGC GATCACCGGC CTGTCGCTCG CGCTCGCGAT CGTGGTGTCC GGCTTCGCGC TGTATACGAT CGCCGGCGCC CAACTGACGA GGCTGCGGCT CGGCATCGGC GGCGTTCTGA TGGGGCTCGG CATCGCGGGC ATGCATTACA CCGGCGACGC CGCGATGCGG ATGAAGCCCG CCATCGAGTA CGACCCGCTG CTGTTCACGG CATCGATCGT CATCGCGCTC GTCGCCTCGA CGGTCGCGCT ATGGATCGCG CAGACGCTCA TCGGCATCGG CCGATCGCGG CTGGCCCGCA TCGGCGCGGC CGGCGTGATG GGCGCGGCGA TCACCGGCAT GCACTACACC GCCTACGCCG CCGCGATCTT CGCCCCCGGC TCGACCTGCG GCGCGGCGAC CGGCATCGAT CTGCGCTGGC TCGCGGCGAC CGTCGCGCTC TTCACGGTCG CGATCCTGAT CGTCGCGCTG ATCCTGTCGC ACTTCGACGT GCGCACGACG CTGCTCGCCG GATCGGTTTC GCGCCTGAGC GGCCAGATCG TGCGCATGGC CGCATTCGAC ACGCTCACGG ATCTGCCGAA CCGCCACACG CTGAACGAGC ACCTCGGCCG CGCGCTCGCG GCGGCGCGGG CGCGCGGCGG CAAGCTGGCG ATCCTGTTCA TGGATCTCGA CGGATTCAAG ACCATCAACG ATTCGCTCGG CCACCCGGCC GGCGACGAAG TGCTGAAAAC CTTCTCGCAG CGGCTGCTGC GCTGCGTGCG AGACGGCGAC ATCGTCGCGC GCCTCGGCGG CGACGAATTC GTCGTGCTGC TGGAGAGCGT TTCGTCGGAC GATGAAGCGG CCCGCGTCGC GCGCGATGTC CTCGAACGGA TGCGCAAGGG GCGCTGGAAC GACGGGCAGG CGCTACAGGT CACGCCGAGC ATCGGCATCG CGCTATATCC GAAGGACGGC GATACGGCCG ACACGCTGCT CAGGCACGCC GATGCGGCGA TGTATGCGGC CAAGCGCGGC GGCCGCTGCA CCTACCGCTT CTTCGAGGCG ACGATGGACG AGGCGGCGGC GCGGGCGCTC AAGCTTCAGC ACGCGCTGCA CGAAGCGCTC GATTCCGACT ACTTCTCGCT GTGCTTCCAG CCGAAATTCC GCTGCGACGG CCACCGGCTC GCGGGCGCGG AAGCGCTGTT GCGCCTGAAT CATCCGACGC TCGGCAAACT CGCGCCGATG GAATTCATCC CCGTGGCCGA ACGCTCCGGC CAGATCATCG AGATCGGCTA CTGGGTGATC CGCGAAACGT GCCGGCACCT CAGACGCTGG CGGTCCGCGC ACAGGGCGGC CTGCCGCATC GCGATCAATC TGTCGCCTCG GCAGCTCGCG CAGCCGGATC TCGTCGCGAA CATCCTCGAG ATCGTGCGCG CCGAGCACGT CGAGCCGCGC CAGTTGATGT TCGAGATCAC CGAATCGGTC GCGATGGAAG ACCCGCCGCG CACGATCGAG ATGATCCGGC TGTTCCAGGC GCACGGCTTC GAGATCGCGA TCGACGACTT CGGCACCGGC TATTCGAGCC TCGCCTATCT GCAGCGATTC GGCGCGAAGC AGCTCAAGAT CGACCGATTC TTCACCCACG CGCTCGACGA GCAAGGCCAC GAAGGCGGCG CGATCGTCTC CGCGATCATC GCGCTCGCCC ACTCGCTCGC GATGGACGTG GTCGCCGAAG GCGTCGAGAC GCGCTCGCAG CTCGACCGGC TCAAGACGCT GATGTGCGAT GAAATCCAAG GGTTCCTGCT CGGCCGCCCC GTGCCGCCGG AAGAGTTCGA GGCGATGGTG CCGCTGCACT CCGAGGCGCC GGCATGA
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Protein sequence | MHGTYNLWLV ALSLAVATLA SYTALDLSGR IALLAHGRLR HAWLAGSAVA MGVGIGSMHV IGVLSVTLPI RIGFDAAITG LSLALAIVVS GFALYTIAGA QLTRLRLGIG GVLMGLGIAG MHYTGDAAMR MKPAIEYDPL LFTASIVIAL VASTVALWIA QTLIGIGRSR LARIGAAGVM GAAITGMHYT AYAAAIFAPG STCGAATGID LRWLAATVAL FTVAILIVAL ILSHFDVRTT LLAGSVSRLS GQIVRMAAFD TLTDLPNRHT LNEHLGRALA AARARGGKLA ILFMDLDGFK TINDSLGHPA GDEVLKTFSQ RLLRCVRDGD IVARLGGDEF VVLLESVSSD DEAARVARDV LERMRKGRWN DGQALQVTPS IGIALYPKDG DTADTLLRHA DAAMYAAKRG GRCTYRFFEA TMDEAAARAL KLQHALHEAL DSDYFSLCFQ PKFRCDGHRL AGAEALLRLN HPTLGKLAPM EFIPVAERSG QIIEIGYWVI RETCRHLRRW RSAHRAACRI AINLSPRQLA QPDLVANILE IVRAEHVEPR QLMFEITESV AMEDPPRTIE MIRLFQAHGF EIAIDDFGTG YSSLAYLQRF GAKQLKIDRF FTHALDEQGH EGGAIVSAII ALAHSLAMDV VAEGVETRSQ LDRLKTLMCD EIQGFLLGRP VPPEEFEAMV PLHSEAPA
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