| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A1166 |
|---|
| Symbol | |
|---|
| ID | 4890513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 1138724 |
|---|
| End bp | 1139734 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640147435 |
|---|
| Product | ABC periplasmic-binding sugar transport protein |
|---|
| Protein accession | YP_001078353 |
|---|
| Protein GI | 126447825 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.11964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCG CCGTCGCGCT CGCGATCGGC GCCGCCCCCG CTTGCGCGTC GCCCGCCGCC
GGCGCTGCGC CGCCGGGGCC GCGCGCGGGC CATGCGCCGC TGTCGCTCGC CGGCAAGCGG
ATCGGCATCA CGGCGGCCGG CACCGATCAC TACTGGGATC TGCAGGCGTA CCAGGGCGCG
GTGGACGAAG TGAAGCGCCT CGGCGGCACG CCGATCGCGC TCGACGCCGG CCGCAACGAC
AGCCGCCAGA TCGCGCAGAT CCAGACGCTG ATCGCGCAAC AGCCCGATGC GATCATCGAG
CAGCTCGGCA CCGCATCCGT GCTCGAGCCG TGGCTCAGGA AAATCCGGCA AGCGGGCATC
CCGCTTTTCA CGATCGACAC CGCGTCGCCG TCGAGCCTGA ACGTCGTCAC GTCGGACAAT
TTCGCGATCG GCTCGCAGCT CGCGCTGAAG CTCGTCAACG ATATCCGCGG CGAAGGCAAC
GTCCTCGTGT TCAACGGCTT CTACGGCGTG CCCGTGTGCG CGATCCGCTA CGACCAGCTG
AAAGCCGTGC TGAAGTGGTA TCCGAAGGTG AAGATCATCG AGCCCGAGCT GCGCGACGTG
ATTCCGAACA CGGCGCAGAA CGCGTACGCG CAGATCAGCC AGTTGCTGCA GAAGTATCCG
AAAGGCGCGA TCTCGGCGAT CTGGGCCGCG TGGGACATTC CGCAGGTCGG CGCGACGCAG
GCGGTCGACG CGGCCGGCCG ACGCGAGATC CGCACGTACG CGGTGGACGG CAGCCCCGAG
GCGGTCGCGC TCGTGAGGAA TCCGACCTCG AGCGCGGCGG CCGTCGTCGC GCAGCAGCCG
GCGCTGATCG GCCGCACCGC CGTGCGCAAC GTCGCGCGCT ATCTGGCGGG CGACCGATCG
CTGCCCGCGT ACACGTTCGT GCCGTCGGTG CTCGTCACGA AGGACGACGC GGGTGTCGCG
CGGCCTGCGC TCGGGCAGAC GCCGGCCGCC GCCGGGCTCG CGCGGCGATG A
|
|---|
| Protein sequence | MLFAVALAIG AAPACASPAA GAAPPGPRAG HAPLSLAGKR IGITAAGTDH YWDLQAYQGA
VDEVKRLGGT PIALDAGRND SRQIAQIQTL IAQQPDAIIE QLGTASVLEP WLRKIRQAGI
PLFTIDTASP SSLNVVTSDN FAIGSQLALK LVNDIRGEGN VLVFNGFYGV PVCAIRYDQL
KAVLKWYPKV KIIEPELRDV IPNTAQNAYA QISQLLQKYP KGAISAIWAA WDIPQVGATQ
AVDAAGRREI RTYAVDGSPE AVALVRNPTS SAAAVVAQQP ALIGRTAVRN VARYLAGDRS
LPAYTFVPSV LVTKDDAGVA RPALGQTPAA AGLARR
|
|---|
| |