| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0842 |
|---|
| Symbol | |
|---|
| ID | 4889210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 777917 |
|---|
| End bp | 779176 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640147116 |
|---|
| Product | putative diaminopimelate decarboxylase |
|---|
| Protein accession | YP_001078041 |
|---|
| Protein GI | 126446956 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.145845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA ACCTCCACGC CTTCACTGCC GCGGACACCG CGCCGAGCAC CGAATACTGG
TGGGCGCGCG AGCGGCTGCA CTACCGCGGC AACGCGCTGC ATTTCTGCGG CCGCGACGTC
GCCGAACTCG CGGCCGCGTT CGCCGAGCCG GTGTTCCTGT ACGACCCGCA GCGCGCGCTC
GACAACGTCG CGCGCCTGCA ACGCGCGCTC GGCGACCTGC AACGCGGCGA TTTCCGCCTC
CATTACGCGA TGAAGGCGAA TCGCTTTCGC CCATTGCTGT CCGAGCTGCG GCGCTCGCCG
CTCTTCGGCA TCGACGCATG CTCGCCCGAG GAGCTGCGCG AGGCGCTCGC ATGCGGTTTC
GCGCCCGAGC GGATCTCGTA CACCGCGCAC GGGATGATGC CGGACGAAGC CGCGCTCCTC
GCCGCGCTGC CGGGCGTGCA CGTGAACTGC GACACGCTGA GCGCGATCGC GCTGCTCGGC
AGCCGCTCGC CCGGGCGCGA GATCGGCATT CGCGTGAACC CGGGCGTCGG CATCGGCTAC
GGCGACAGCG AGCGGCTGAG CTACGCGGGC GCGGCGGTGA CGAAGTTCGG CATCTACGCG
GAGCAGTTCG GCGCGGCGCT CGAGCTCGCC GCGCGGCACG GCCTGGCCGT GACATGGCTG
CATTGCCACG CGGGCTGCGG CTATCTCGAT GCGCAGCTCG AATCGTTCGA GCGCGTGCTC
GACGCGCTCG ACGCGTTCGC CGCGCGCGTG CCGGGGCTGC GCGGCATCAA CCTCGGCGGC
GGGCTCGGAC TGCCGCACCG CGCGACGGAT CGGCCGCTCG ATCTCGAGCG CTGGCGCGCG
GCCGTGCACG CGCGCTTCGG CGGCCGGCCG CTCGCGATCG CGATCGAACC CGGCGACTTC
ATCGCGAAGG ACGCCGGCAT GCTCGTGCTG CGCGTGGCAT ACGTCGAGCT CAAGCGCAAC
CGCCGCTTCG TCGGGTTGAA CGGCGGCTTC AATCTCGCGA TCGAACCCGC GTTCTACGAT
CTGCCGTGCG AGCCCGTGCC GTGCGTGCGC CGGCCGGGCC CCGCGCAATC GGTGTGCGTC
GCCGGCAACA TCAACGAAGC GCTCGACGTG TGGGGCAACG ACGTGAGCCT GCCGCCCGTC
GAGCCGGGCG ATTTCATCGC ACTGCTGAAC GCCGGCGGCT ATGCGTCGTC GATGAGCTCG
AACCATTGCC TGCGCGGGCA GTTCCGCGAG CTCGCGCTGT TCGACGCCGC ACCGCACTGA
|
|---|
| Protein sequence | MNANLHAFTA ADTAPSTEYW WARERLHYRG NALHFCGRDV AELAAAFAEP VFLYDPQRAL
DNVARLQRAL GDLQRGDFRL HYAMKANRFR PLLSELRRSP LFGIDACSPE ELREALACGF
APERISYTAH GMMPDEAALL AALPGVHVNC DTLSAIALLG SRSPGREIGI RVNPGVGIGY
GDSERLSYAG AAVTKFGIYA EQFGAALELA ARHGLAVTWL HCHAGCGYLD AQLESFERVL
DALDAFAARV PGLRGINLGG GLGLPHRATD RPLDLERWRA AVHARFGGRP LAIAIEPGDF
IAKDAGMLVL RVAYVELKRN RRFVGLNGGF NLAIEPAFYD LPCEPVPCVR RPGPAQSVCV
AGNINEALDV WGNDVSLPPV EPGDFIALLN AGGYASSMSS NHCLRGQFRE LALFDAAPH
|
|---|
| |