Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0740 |
Symbol | bsaO |
ID | 4889488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 683145 |
End bp | 685022 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640147016 |
Product | type III secretion system protein BsaO |
Protein accession | YP_001077941 |
Protein GI | 126445673 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.513099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTATG CCGACACGGC CAGACGATAC GCAGCCGCGC TTGCCGCGTC GCTGCTGATG ACGGGCGCGG CATTCGCCGC GCCGACCGAC GCGGCGCCGC TCGCCGACGC GCCCGCGGCG GCGAGCGCGA CGCCCGACGC ACGGGACGGC GACGCGTCGC GCGTGGCCGC GCCGCCGGCG CGCGCGCCGC AGGACGACGA GCGCCACTTC GTCGCGAACG ACGCGAGCAT CAGCGTGCTG CTCAATGCGC TGTCGGGCCG GCTGCACAAG CCGATCGTCG CGAGCGAGAA GGTGCGCCGC AAGCACGTGA CGGGCGAGTT CGACCTCGCG CAGCCCCGCG CGCTGCTCGC GCGGCTCGGC GAATCGATGT CGCTGCTCTG GTACGACGAC GGCGCGTCGA TCTACATCTA CGACAACTCG GAGATCAAGA ACGCGGTCGT CTCGATGCGC CATGCGACGG TGCGCAACCT GCGCAATTTC ATCCGGCAGA CGCGGCTCTA CGATCCGCGC TTTCCGGTGC GCGGCGACGA CCTGAGCAAC ACGTTCTACG TGACGGGCGC GCCCGTCTAC GTGAATCTCG TCGCCGCCGC CGCGCGCTAT CTCGACGAGG TGCGCTCGAA CGAGGCGAGC GACCGGCAGG TCGTGCGCGT CGTGCAGCTT CACAACAGCT TCGTCGTCGA CCGCCAGTAC ACGCTGCGCG ACAAGGCAGT CGACATCCCG GGCATGGCGA CCGTGCTCGG CCGCATCTTC GGCCCGGCGC GGCCGGGCGC GCCGGCGGAC TCGCCCGTCG CGGCGGCCGA CGCCACGGCG CGCGGCGGCG CGGGCGGCGC GGCGGGCAAG CCGGCGTTCT CGCTTGCCGA TGCGTTGCCC GCGCCGCTCG ACGCCGGCAA CGCGCCGGGC GGCGCGGGCT CGACGCATTC GACAAACCCG GCGAACGCCG CGAGCCCGAT GGGCGGCGCG GCGGGCGGCG TCGCGCTGCC CGCGTCGGAC GGCGTGCGCG CGGTGGCGTA TCCGGACACG AACAGCGTGA TCCTCGTCGG CCGGCTCGAC AAGGTGCAGG ACATGGAGGC GCTGATCCGC TCGCTCGATG TCGAGAAGCG GCAGATCGAG CTGTCGCTGT GGATCATCGA CATCCGCAAG AGCCGGCTCG ATCAGCTCGG CATCGACTGG CAGGGCGCGC TCAATGCGCC GGGCATCGGC GTCGGCTTCA ACAATCGCGG CGGCAACGTG ACGACGCTCG ACGGCACCAG GTTCCTCGCA TCGGTCGCGG CGCTCAGCCA GACGGGCGAC GCCACCGTGA TCTCGCGGCC GATCGTGCTC ACGCAGGAGA ACGTGCCGGC GACGTTCGAC AGCAACCAGA CGTTCTACGC GAAGCTGATC GGCGAGCGCA CGGTGCAGCT CGATCACGTG ACCTACGGCA CGCTCGTCAA CGTGCTGCCG CGGCTCACGC GCGATGGGTC GCAGGTCGAG ATGATCGTCG ACATCGAGGA CGGCAACACC GACGGCGCGA CGAGCGACGG CCAGATCGTC ATCGACAACA ACACGATGCC GCTCGTGAAC CGCACCGAGA TCAACACGGT CGCGCGCGTG CCGCACGAGA TGAGCCTGCT CATCGGCGGC AACACGCGCG ACGACGTCAC GCGCCGCACG TTCCGGATTC CCGGGCTGGC CAGCATTCCG CTGATCGGCG GGCTGTTTCG CGGGCATTCG GATCGGCACG AGCAGGTGGT GCGCGTGTTC CTGATCCAGC CGAAGCTGCT GCGCGCGGGC GCGGCCTGGC CCGACGGCCA GCCGTGGGAA TCGGGCGATC CGGCGGACAA CGCGACGCTG CGCGCAACCG TGCAGATGCT CAAACCCTAC ATGGACGACA AGTCATGA
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Protein sequence | MMYADTARRY AAALAASLLM TGAAFAAPTD AAPLADAPAA ASATPDARDG DASRVAAPPA RAPQDDERHF VANDASISVL LNALSGRLHK PIVASEKVRR KHVTGEFDLA QPRALLARLG ESMSLLWYDD GASIYIYDNS EIKNAVVSMR HATVRNLRNF IRQTRLYDPR FPVRGDDLSN TFYVTGAPVY VNLVAAAARY LDEVRSNEAS DRQVVRVVQL HNSFVVDRQY TLRDKAVDIP GMATVLGRIF GPARPGAPAD SPVAAADATA RGGAGGAAGK PAFSLADALP APLDAGNAPG GAGSTHSTNP ANAASPMGGA AGGVALPASD GVRAVAYPDT NSVILVGRLD KVQDMEALIR SLDVEKRQIE LSLWIIDIRK SRLDQLGIDW QGALNAPGIG VGFNNRGGNV TTLDGTRFLA SVAALSQTGD ATVISRPIVL TQENVPATFD SNQTFYAKLI GERTVQLDHV TYGTLVNVLP RLTRDGSQVE MIVDIEDGNT DGATSDGQIV IDNNTMPLVN RTEINTVARV PHEMSLLIGG NTRDDVTRRT FRIPGLASIP LIGGLFRGHS DRHEQVVRVF LIQPKLLRAG AAWPDGQPWE SGDPADNATL RATVQMLKPY MDDKS
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