| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0716 |
|---|
| Symbol | |
|---|
| ID | 4891130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | + |
|---|
| Start bp | 664027 |
|---|
| End bp | 665691 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640146992 |
|---|
| Product | serine carboxypeptidase family protein |
|---|
| Protein accession | YP_001077917 |
|---|
| Protein GI | 126446177 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG ATTCGACTTC CTCCGGCGGC GCGCAGCCGC TCCATCACGG CGCGAACGGC
TCGGTTCACG CGCCGCCGCC GGTCATCGTC GCGCCGAAGG ACGACGGCGA CCAGCCGTTC
TTCGATCCGG TCGCCTACGG CAACGGCCCC GACGATTCGG TGACGGACAC CACCGAGGCC
GCCGCGATCA CGCACCACAC GGTCCGGATC GACGGCCGCA CGATCGCGTA CACGGCCGCG
GCGGGCCATC TCGTGACCGT CGATCCGAGC AGCTCGCAGC CGGATGCGAA GATCTTCTAC
GTCGCGTTCA CGCAGGACGG CCAGCAGGAG CAAACGCGCC CCGTCACGTT CTTCTACAAC
GGCGGGCCGG GCTCGTCGGC CGTGTTCGTG CTGCTCGGCT CGTTCGCGCC GCGGCGCATC
CGCACGTCGA TGCCGAGCTT CACGCCGCCC GCGCCGTACC GGATGGAAGA CAACCCGGAC
AGCCTGCTCG ACAAGAGCGA TCTCGTGTTC ATCAACCCGG TCGGCACCGG CTATTCGGCG
GCGATCGCGC CGCGCAAGAA CCGCGATTTC TGGGGCGTCG ATCAGGACGC GAACTCGATC
AAGCAGTTCA TCAAGCGCTA TCTGACGAAG CACAACCGGT GGAATTCGCC GAAGTACCTG
TTCGGCGAAT CGTACGGCAC CGCGCGCAGC TGCGTGCTCG CGTACAAGCT GCACGAGGAC
GGCGTCGACC TGAACGGGAT CACGCTGCAG TCGTCGATTC TCGATTACCG GCAGGCGGGC
AATCCGGTAG GCGCGCTGCC CACCGCGGCG GCCGACGCGT GGTATCACAA GCGGCTCGGC
GTCGCGCCGA CGCCGACCGA TCTCGGCGCG TTCGTGGAGG AGGTCGCGCA GTTCGCGCGC
ACCGACTATC TCGGCGCGCT GCGCAAGTTC CCGCAGGCCG ATGCGGCCGT CGTCAAGAAG
CTGTCCGACT ACACCGGCAT CGACACGACG ACGTTGCTGT CGTGGAGCCT CGACATCGCG
GGCTACGACG CGCGCGGCAA CGCGCTGTTC CTCACGACGC TGCTGAAGGC ACAAGGCCTC
GCGCTCGGCG CGTACGACGG CCGCGTGACG GGAATCGAAT CGGGGATCGC GGGCCGGATC
GATCCGAACT CGGGCGGCAA CGATCCGACG ATGACGGCTG TGTCGGGCGT CTACACGGCG
ATGTGGAATA CGTACCTGAA CGAGCAGTTG AAGTACACGT CGAACTCGTC GTTCACCGAC
CTGAACGACC AGGCATTCAA GTACTGGGAC TTCGGCCACA TCGATCCGAC GGGCGAACAG
CAGGGCGTCG ACGCGAAGGG CAACGTGATC CTGTACACGG CGGGCGATCT CGCCGCGACG
ATGGCGCTCA ACGTCGATCT GAAGGTGCTG TCGGCGAACG GGCTCTACGA TTTCGTCACG
CCGTTCTACC AGACGGTGCT CGATCTGCAG CAGATGCCGC TCGAGGACCC GAAGGTGCGG
CAGAACCTGT CCGCGCGCTT CTATCCGTCC GGACACATGG TGTACCTCGA CGGCGGCTCG
CGCACCACGC TCAAGCACGA CCTCGCGCAG ATGTACGAAT CGACGGTGCG CGACACCGCG
GCGGTGATGC GCATTCGCGC GTTGCAGGAG AAAAAGCGCG CGTAG
|
|---|
| Protein sequence | MSIDSTSSGG AQPLHHGANG SVHAPPPVIV APKDDGDQPF FDPVAYGNGP DDSVTDTTEA
AAITHHTVRI DGRTIAYTAA AGHLVTVDPS SSQPDAKIFY VAFTQDGQQE QTRPVTFFYN
GGPGSSAVFV LLGSFAPRRI RTSMPSFTPP APYRMEDNPD SLLDKSDLVF INPVGTGYSA
AIAPRKNRDF WGVDQDANSI KQFIKRYLTK HNRWNSPKYL FGESYGTARS CVLAYKLHED
GVDLNGITLQ SSILDYRQAG NPVGALPTAA ADAWYHKRLG VAPTPTDLGA FVEEVAQFAR
TDYLGALRKF PQADAAVVKK LSDYTGIDTT TLLSWSLDIA GYDARGNALF LTTLLKAQGL
ALGAYDGRVT GIESGIAGRI DPNSGGNDPT MTAVSGVYTA MWNTYLNEQL KYTSNSSFTD
LNDQAFKYWD FGHIDPTGEQ QGVDAKGNVI LYTAGDLAAT MALNVDLKVL SANGLYDFVT
PFYQTVLDLQ QMPLEDPKVR QNLSARFYPS GHMVYLDGGS RTTLKHDLAQ MYESTVRDTA
AVMRIRALQE KKRA
|
|---|
| |