Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0661 |
Symbol | |
ID | 4890426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 611538 |
End bp | 613148 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640146937 |
Product | type II/IV secretion system protein |
Protein accession | YP_001077862 |
Protein GI | 126447382 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.368751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCACG ACGCGCAACG ACCCGACACG GCCGCCGCGC GCGCGACGCC GAGCGCCGCC GACGCCGCCG CGCCGCCGCG CGGCCCGCGC GCGGTCAGCG AGGCCGGCGA TTTCGCCGCG AGCGTCGAGG AGCGCAAGTT CGTCTGCCTG TTCGACGACG GGCGGCTGCT GATCGCCGAA GGCCACGAGA TGAATCCGTT CGTGCTGTCG TATCGCGCGC GCCTCGACCG GATGGGCCGG CCGTACCGGC CGACGCCGGC GACGCTGATG CAGGTGCGCG AGGCGTACCG CCAGCACGTG GCGGGCGGCG GCGAGCGGCT CGACCACACG GTGATGCAGG TGCTCGCGAA GGAGCTGATC GGCCGCGCGT GCCGCGAGCG CGCATCCGAC GTGCACATTC GGGTGCGCCG CTTCAGCACG GAGGTCTACT TCCGGATCCA CAACGAACTC ATGCGCGTGA ACGAGCACAC GCGCGAGCAC GGCGAGCGGC TGCTCGCGAC GCTGTATGGC GCGATGACGA CCGTCTCGGA CAACAGCTAC CGGCCGAGCG AGCGGCAGGA CGCGAGCATC GGCGACCGCG ACAAGCTGCC GGACGACCTG TACGGCGTGC GGATCGCGAC GACGCCGACG AGCGAGGGCA GCCTGATGGT GCTGCGGCTG CTGTACAACG ATGCGGGCGA CGCGACCGAT CTCGCGGCGC TCGGCTTCGC GCCCGAGCAC GTCGCCGCGT TCCGCATGCT GCGCGCGCAG CCGCACGGGA TGAACATCAT CAGCGGCCCG ACGGGCTCCG GCAAGTCGAC GACGCTGCAG CGCATGCTCG CCGCGCAGAT CGACGAATCG CACGGCAGCC TGCACGTGAT CACCGTCGAG GATCCGATCG AATATCCGAT CGACGGCGCG GTGCAGACGC CGGTGGCGAA CGCGCCGACG GAGGACGCCC GCGCGCTCGC GTTCGCGGCG GCGATCACCA ACGCGATGCG GCTCGATCCG GACACGATCA TGATCGGCGA GATCCGCGAT CGCGTGTCCG GGCAGACGGC GCTGCGCGCG TCGATGACGG GCCATCAGGT GTGGACGACC GTGCACGCGA ACAGTGCGCT CGCGATCGCC GATCGCCTGA TCGATCTCGG CCTGCACGCG CGGATGATCA CCGATCACAC GGTGATCTCC GGGCTCATCA GCCAGCGCCT CGTGAAGCTG CTGTGCCCGC ACTGCAAGGT GCGGCTCCTC GATCATGCGG AGCGGATCGA GCCGGGCCTG CTCGCGCGGC TGCGGCTCGC GCTCGACACC CGGATGAGCG AGGTCTGCAT CACGGGCGAC GGCTGCGAGC AGTGCGGCAT GGCCGGCACG ATCGGCCGCA CGGTGGTGGC CGAGGTGATC CTGCCCGACG CGCGGCTCTT CGAGTTCCTG CGCGACGGCG ACAAGGTCGG CGCGCTCGAG TACTGCACCC GCACGCTCGG CGCGATGACG CTCGCCGAGC ACGCACTGCG CAAGGTCGCG GCGGGGCTCG TCGATCCGCG CGGCGTCGAG CGCGTGGTCG GCGCGCTCGC GCCGGTGACG GGCGACGCGC GACAGCAGCT GTCGCTCGTC GGATTCAGCT ATGGCACTTG A
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Protein sequence | MSHDAQRPDT AAARATPSAA DAAAPPRGPR AVSEAGDFAA SVEERKFVCL FDDGRLLIAE GHEMNPFVLS YRARLDRMGR PYRPTPATLM QVREAYRQHV AGGGERLDHT VMQVLAKELI GRACRERASD VHIRVRRFST EVYFRIHNEL MRVNEHTREH GERLLATLYG AMTTVSDNSY RPSERQDASI GDRDKLPDDL YGVRIATTPT SEGSLMVLRL LYNDAGDATD LAALGFAPEH VAAFRMLRAQ PHGMNIISGP TGSGKSTTLQ RMLAAQIDES HGSLHVITVE DPIEYPIDGA VQTPVANAPT EDARALAFAA AITNAMRLDP DTIMIGEIRD RVSGQTALRA SMTGHQVWTT VHANSALAIA DRLIDLGLHA RMITDHTVIS GLISQRLVKL LCPHCKVRLL DHAERIEPGL LARLRLALDT RMSEVCITGD GCEQCGMAGT IGRTVVAEVI LPDARLFEFL RDGDKVGALE YCTRTLGAMT LAEHALRKVA AGLVDPRGVE RVVGALAPVT GDARQQLSLV GFSYGT
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