Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0658 |
Symbol | |
ID | 4889906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | + |
Start bp | 607945 |
End bp | 609717 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640146934 |
Product | type IVB pilus formation outer membrane protein |
Protein accession | YP_001077859 |
Protein GI | 126447055 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTGC TGTTCGCCAT TTCATTACTG GCCGTCGCAT GGCTCGCCGG CTGCACCGGC CTTCGCGGCG GCATCGAGCG CGACGCGCGG CGCGATTCGA ACGAAACCGG CGCGCTGCTC AAGCGCGCAT CCGACGGCGA CAACAGCGTG CGCTCGCTCG CGCCCGTCGT CGTCGACAAC GGGCTGTGGG TGTCCGCGGG CACCGTCAAG CTGCGCAACA GCGAGCAGTT GCCGCCGCTG TTCGACGAGC CGGCGTCGTT CGATCGCTCG GTCGCTTCGT TGTCCGAATT CGCCGAGCAG ATCACGCGCC TGACCCAGGT GCCGACGCAG GTCGCCGCGA GCGCGCAGCA GGCGGCCGCG CGTTCGCAGC ACGGCGGCGC GGGCGACGCC GCGCGCGGCG CGCCGGCCTT TCTCGACGCA TCGGGCGCGC GCGCGGTGCC GCCGCTGCCC CCCGGCCTGC CGGGCGGCGC ATCGGCGGGC GGCGGCAAGA CGGGCGGCGG CGCGGCGGGC GCGGGCTCGG AGGGCGGCGG CGGCACGTCG TTCGCGCCGG TGCGCGTGCT GTACGCGGGC GGCACGCTGC GCGGCCTGCT CGACGCGGCC TGCGCGCGCT TCGGCGTGTC CTGGAAGTAC GAGCAGGGGG CGATCCGCTT CTTCTTCACC GATACCCGCA CGTTCCAGGT CAACGCGATT CCGGGCGACT CGTCGCTGAA CGCATCGGTC GTGAGCGGCG CGACGAGCGA CGGCGCCGCG GGCGGCTCGC AGTCGGGCGG CTCGGGGGGC TCGGGCGGCG GCATCAACGG CGCGGGCTCC GGCACGACGG GCCTCACCGC GAACAACACG GCGAACACCG CGGTGAACTC GCAGCTGTCG GTGTTCAACG GCCTGCAAAG CGCGATCCAA TCGATGCTCT CGCGCTACGG CAGCTCGGTC GCCTCGCCCG CGACGGGATC GATCTCGGTG ACCGACACGC CCGACGTGCT CGAGCGCGTC GCCGCGTTCA TGGCGCAGCA GAACCGCTCG CTGTCGCGGC AGGTGCTGCT CAACGTGACC GTGCTCAGCG TGTCGCTGCA GGCGGGCGAC GCGTACGGGA TCGACTGGAA CCTCGTCTAC AAGACGATGT CCGCGGGGTT CGGCATCACC AATCCGTTCC ATCCGACGGC GCTGACGGCG CCCGCCGACA TGTCCGCGGC GGTGCTCAGC CCGACGAGCC GCTTCAACGG CACGAAGCTG CTGATCCGCG CGCTGTCGCA GCAGGGGACG GTGCGGCGCA AGACGTCGGC GTCGGTCACG ACGCTCAACA ACCAGCCGGT GCCCGTGCAG GTCGCGACGC AGACGGGCTA CCTCGCGTCG GTGTCGACGA CGAACACCGC GAACGTCGGC TCGTCGACGG CGCTCACGCC GGGCGTCGTG ACGACGGGCT TCAACATGAC GCTGCTGCCG CACGTGCTCG ACGACGGCAC CGTGATGCTG CAGTTCTCGA CCAACATCTC GTCGCTGCTC GAGCTGAAGG AGGTGACGAG CAGCACCGGC GGCAGCGGCC TGGCGCGCAT CCAGACGCCC GACGTCGACA TGCGCAACTT CCTGCAGCGC GTCGCGATGA AATCGGGCGA GACGCTCGTC ATCAGCGGCT ACGAAGGCGC GAACGATTCG CTCGACGAGC GCGGCGTGGG CACGCCGAAG ATGATCGCGC TCGGCGGCGG CTACGAGGCG CAGCGCGCGC GCGAGGTGAT CGTGATCCTG ATCACGCCCG TCACGCAGCG CGGCGGCGCC TGA
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Protein sequence | MRVLFAISLL AVAWLAGCTG LRGGIERDAR RDSNETGALL KRASDGDNSV RSLAPVVVDN GLWVSAGTVK LRNSEQLPPL FDEPASFDRS VASLSEFAEQ ITRLTQVPTQ VAASAQQAAA RSQHGGAGDA ARGAPAFLDA SGARAVPPLP PGLPGGASAG GGKTGGGAAG AGSEGGGGTS FAPVRVLYAG GTLRGLLDAA CARFGVSWKY EQGAIRFFFT DTRTFQVNAI PGDSSLNASV VSGATSDGAA GGSQSGGSGG SGGGINGAGS GTTGLTANNT ANTAVNSQLS VFNGLQSAIQ SMLSRYGSSV ASPATGSISV TDTPDVLERV AAFMAQQNRS LSRQVLLNVT VLSVSLQAGD AYGIDWNLVY KTMSAGFGIT NPFHPTALTA PADMSAAVLS PTSRFNGTKL LIRALSQQGT VRRKTSASVT TLNNQPVPVQ VATQTGYLAS VSTTNTANVG SSTALTPGVV TTGFNMTLLP HVLDDGTVML QFSTNISSLL ELKEVTSSTG GSGLARIQTP DVDMRNFLQR VAMKSGETLV ISGYEGANDS LDERGVGTPK MIALGGGYEA QRAREVIVIL ITPVTQRGGA
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