| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0656 |
|---|
| Symbol | |
|---|
| ID | 4891281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | - |
|---|
| Start bp | 605953 |
|---|
| End bp | 607059 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640146932 |
|---|
| Product | putative twitching motility protein PilT |
|---|
| Protein accession | YP_001077857 |
|---|
| Protein GI | 126446329 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.739183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC ATGCCGCCGC CGCCCCGCTG CGCGATCTCG CGGGCGAAGT GCTCGGCCTG
ATCGACCTGA AGCAGATGTT TACCGACATC CACATCGAAC AGGACCGCCC CGTCACGATC
AAGACGCCGC GCGGCTGGGT CGAGACGAGC GACGAACCGG TGCTCCTCGA CGACATGCGC
CCTCTGCTCG ATGCGATCGA CGAGCACTGG GAGAGCGCGC TGCGCCAGGG CACGCTCGAC
CGCCCGTTCG TCCTCACGCG CTGCCGGCTG CGCTGCCACG TGTATCGCGC GGGCGGCGGG
CGCAAGATCG TGATCTCGAT GCGGCGGCTG CCGCTCAAGC CGCTGCCGCT CGAGGAGCTC
GGCCTGCCCG TCTACGTGCG CTCGATGCTC GACAACACGA AGGGCATCAT CCTCGTCACC
GGCCCGACGG GCTCCGGCAA GACGACGACG ATCGCTTCGC TGCTCGAGCA CGTCAACGCG
ACGCGCAACA CGCATATCGT CACGATCGAG GAACCGATCG AATACTATCT GGAGCGCCGC
CAGTCGATCA TCTCGCAGCG CGAAGTGCCG ACCGACACGC CGAATTTCCC GCACGGGCTG
CGCGAGGCGC TGCGGCAGAA ACCGGACGTC GTGATGGTGG GCGAGGTGCG CGACGCGCAG
ACGGCCGACA CGCTGCTGCA GGCGGGCGAA TCCGGGCACC TCGTGCTCGC GACGATGCAC
ACGGGCAGCG CGGTCAGCGC GCTCAACAAG CTGCTGTCGT TCTTTCCGGT CGAGCAGCGC
GACCGGCACG CGGTCGCGCT CGCCGAATCG CTGATCGGCA TCGTCTGCCA GAGCCTCGTG
CCGAGCGCGG ACGGCGAAAG CCTCGTGCTC GCGAGCGAGC TGCTGTTCAA CAACAACAAC
CAGGTCGCAA AGCTGATCGC GGACCCGACC AAGCTGCACC TCGTCAACGA GTTCCTGCGC
CGCCGGGAGG ACAACATGTC GCGCTCGCTG AACGACGACC TCGCGGCGCT CGCGGCCCGC
AACCGGATCA CGACGAAGGA TGCGTTACGG GCCACTTACA ATCGGCTCGA GCTGCATGAA
ATGATGCAGT CGATTGTTAA TCGATAG
|
|---|
| Protein sequence | MNQHAAAAPL RDLAGEVLGL IDLKQMFTDI HIEQDRPVTI KTPRGWVETS DEPVLLDDMR
PLLDAIDEHW ESALRQGTLD RPFVLTRCRL RCHVYRAGGG RKIVISMRRL PLKPLPLEEL
GLPVYVRSML DNTKGIILVT GPTGSGKTTT IASLLEHVNA TRNTHIVTIE EPIEYYLERR
QSIISQREVP TDTPNFPHGL REALRQKPDV VMVGEVRDAQ TADTLLQAGE SGHLVLATMH
TGSAVSALNK LLSFFPVEQR DRHAVALAES LIGIVCQSLV PSADGESLVL ASELLFNNNN
QVAKLIADPT KLHLVNEFLR RREDNMSRSL NDDLAALAAR NRITTKDALR ATYNRLELHE
MMQSIVNR
|
|---|
| |