| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0638 |
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| Symbol | sctS |
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| ID | 4889065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009079 |
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| Strand | + |
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| Start bp | 592876 |
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| End bp | 593139 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640146914 |
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| Product | type III secretion inner membrane protein SctS |
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| Protein accession | YP_001077839 |
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| Protein GI | 126446836 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.864353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATCG ACGACCTGAT CCGGCTCACG TCGCAAGGCA TGATGCTGTG TCTCTACATC
TCGCTGCCGG TCGTACTCGT CGCGGCCGCC TCCGGCCTGG CGATCTCGTT CCTGCAGGCG
ATCACGTCGC TGCAGGAGCA GAGCATCTCG TACGGCGTGA AGCTCGTCGC GGTGACGGTG
ACCGTCGCGA TCGCCGGGCC GTGGGCGGCC GCCGAGATCC TGCATTTCGC GCAGCAACTG
ATGTCCGCGG CGGTGCCGTC GTGA
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| Protein sequence | MEIDDLIRLT SQGMMLCLYI SLPVVLVAAA SGLAISFLQA ITSLQEQSIS YGVKLVAVTV
TVAIAGPWAA AEILHFAQQL MSAAVPS
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