Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_A0596 |
Symbol | |
ID | 4890275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009079 |
Strand | - |
Start bp | 541036 |
End bp | 543456 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640146872 |
Product | ricin-type beta-trefoil lectin domain/galactose oxidase domain-containing protein |
Protein accession | YP_001077797 |
Protein GI | 126447184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.39383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTCT TTCGATTCGC GTGGCGGCAC GGCCGATATT GGCTTTGCCT GCTGATTGCG AGCGTATTGC TGCCGCAAGG CGCGGCGGCG GCCGTCACGG CGTCCTACAC GGACATCGTC GGCGCGGACA GCGGGCTGTG CGTCTCGACG GCCGGCAACT CAAGCGCATC GGGCGCGGGC GTCGTGCAGA CCTCGTGCGC GGGCCTGAGC AACACGACAT GGTCGTTCGT TCCCGTCGGC AACCGCTATC ACATCGTGCT GCAAGGCAGC GGCCTGTGCC TGAACGTGCC CGGGGGCTCG CTGAACAGCG GCACGCAATT GATCCAGTAC GCATGCCAGG GCAACGGCCA GACCAATGAC CAATGGACGG TCGTCGCGGT CGGCTCGAGC TACCGGATCG TGTCCGCGTC GAGCGGCATG TGCGTGAACG TGAGCGGCGC ATCGCACGCG AGCGGCGCGG CGCTGATCCA GTATCCGTGC CAGGGCGCGA GCGCGCTCAA CGATCAATTC AATCTGTATC TGCCCGTCGT CGCGGCCACC AACGTCACGG CGGCGAACAG CAACCTCTGC GTGAGCGTCA ATGGCGGATC GACGGCCGCC GGCGCATCGA TCGTCCAGGG AACATGCTCG AATCAGGGCG CCACGGGCTG GTCGCTGCTG CCCGCCGGCA GCGGCTATCA CGTCGTCTCG CAAGGCACCG GGCAATGCCT GAACGTATAT GGCGGATACA CGACGAGCGG CGCGCCGATC ATCCAGTATC CGTGTCAGGG CGACGCGCAG ACGAACGATC AATGGACGCT CGTGCCCGTC GGCTCGAAGT ACCGGCTGAT TTCGGTGTCG AGCGGCATGT GCCTGAACGT GAGCGGCGGC TCGCTGTCGC CGGGCGCGCC GCTGATCCAG TACCCGTGCC AGGGCGCGAA CGCGCTCAAC GACCAGTTCT CGCTCAGCCT GCCGCAGACT TTCCCGGTCA CGCTGCCGTC CGCATGGAGC CCCGTGATTC CGCTGCCCGT CAATCCGATC GGCATCGCGA ACGCGCCGAA CGGCAAGCTC GTGATGTGGT CCGCTGATCA GCAATTGAGC TTCCAGAACG ACGTCGGCAG CAAGGCGACG CAGACGCAGA CCGCGGTGTT CGACCCGGCG ACGAACACCG CGACGCAGTA TCTCGAAACC TCGGCGGGCT CGGACATGTT CTGCACCGGC ACCGCGATGC TGCCCGACGG CCGCCTGCTC GTGAACGGCG GCGACAGCAG CCCGAAGACG ACGCTGTACG ACTGGACGAC CAATACGTGG AGCGCCGCGG CGACGATGAA CATTGCGCGC GGCTATCAGG GCGACACGCT GCTGTCGAAC GGCTCGGTGC TCACGCTCGG CGGCTCGTGG AGCGGCGGTC AGGGCGGCAA GACCGCCGAA GTGTGGACGA ACGGCGGCGC GTGGACGCTG CTGCCCGGCG TGCCCGAGAC GAACATCGTC GGCCCCGATC CGCAGGGCAT CTATCGCGGC GACAATCATC TGTGGCTGTT CGCGCAAGGC AACGGCACGG TTTTCCATGC GGGGCCGAGC TCGCAGATGA ACTGGATCTC GACGGCGGGC GGCGGCTCGA TCCAGTCGGC GGGCATGCGC GGCGTCGATC CGTTCAGCAT CAACGGCACC GCGTCGCTAT ACGACGTCGG CAAGATCCTG AAGGCGGGCG GCGCGAAATC GTACCAGCAG AACGGCAGCG TCACGACCTA TGCGTCGAAC TCGGTGTACC AGATCGACAT CACGCGCGGG CCGAACCAGC CGGCATCGGT GCAGCGCCTG AACGGCATGA CGTACCAGCG CGCGTTCGCC AACAGCGTGA TCCTGCCGAA CGGCAGCATC GTGATGATCG GCGGCCAGAG CGTGCCGATG CCGTTCACCG ACACGACCGC GATCATGGTC CCCGAAATCT GGGATCCGGC GACGCAACGC TTCAACCTGC TCAAGCCGAT GCAGACGCCG CGCACCTATC ACAGCACGGC GATCCTGATG GCGGACGGCC GCGTGTTCGC GGGCGGCGGC GGCCAGTGCG GCACCGGCTG CGCAATGAAC CATCTGAACG CGGAGATCCT CACGCCGCCT TACCTGCTCA ACGCGGACGG CACGCCGGCG CCGCGGCCGG TGATCACGAA CGCGCCGGCC ACGGCGAAGC TCGGCGCGAC GATCGCCGTG TCGACGCAAG GCCCCGTCGC GTCGTTCGTG CTGATGCGCC TGTCGTCCGT CACGCATACG ACGAACAACG ATCAGCGGCG CATTCCGCTC GCGATCGCGT CGTCCGGCGG CACGAGCTAC CAGCTCGCGA TTCCCGCCGA TCCCGGCGTG GTCCTGCCCG GCTACTACAT GCTGTTCGCG CTCAACGCGC AAGGCGTGCC GAGCGTGTCG GCATCGATCC GGATCTCATG A
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Protein sequence | MHFFRFAWRH GRYWLCLLIA SVLLPQGAAA AVTASYTDIV GADSGLCVST AGNSSASGAG VVQTSCAGLS NTTWSFVPVG NRYHIVLQGS GLCLNVPGGS LNSGTQLIQY ACQGNGQTND QWTVVAVGSS YRIVSASSGM CVNVSGASHA SGAALIQYPC QGASALNDQF NLYLPVVAAT NVTAANSNLC VSVNGGSTAA GASIVQGTCS NQGATGWSLL PAGSGYHVVS QGTGQCLNVY GGYTTSGAPI IQYPCQGDAQ TNDQWTLVPV GSKYRLISVS SGMCLNVSGG SLSPGAPLIQ YPCQGANALN DQFSLSLPQT FPVTLPSAWS PVIPLPVNPI GIANAPNGKL VMWSADQQLS FQNDVGSKAT QTQTAVFDPA TNTATQYLET SAGSDMFCTG TAMLPDGRLL VNGGDSSPKT TLYDWTTNTW SAAATMNIAR GYQGDTLLSN GSVLTLGGSW SGGQGGKTAE VWTNGGAWTL LPGVPETNIV GPDPQGIYRG DNHLWLFAQG NGTVFHAGPS SQMNWISTAG GGSIQSAGMR GVDPFSINGT ASLYDVGKIL KAGGAKSYQQ NGSVTTYASN SVYQIDITRG PNQPASVQRL NGMTYQRAFA NSVILPNGSI VMIGGQSVPM PFTDTTAIMV PEIWDPATQR FNLLKPMQTP RTYHSTAILM ADGRVFAGGG GQCGTGCAMN HLNAEILTPP YLLNADGTPA PRPVITNAPA TAKLGATIAV STQGPVASFV LMRLSSVTHT TNNDQRRIPL AIASSGGTSY QLAIPADPGV VLPGYYMLFA LNAQGVPSVS ASIRIS
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